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Name : epsD (VSAL_I2924) Accession : YP_002264253.1 Strain : Genome accession: NC_011312 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 3166415 - 3168442 bp Length : 2028 bp Strand : - Note : - DNA sequence : ATGGGCAAGGGAGCCTTATTACTGGCGAGTAGCATGGTGTGGACATCAGCTATCGCCAATGACTTTAGTGCCAGTTTTAA AGGGACGGATATTCAAGAGTTCATCAACATTGTTGGTCGAAATTTGGAAAAAACCATTATTGTTGATCCTTCAGTACGCG GAAAAGTGGATGTTCGTAGCTACGATTTATTGAATGAAGAACAATATTATCAATTCTTTTTAAGTGTCCTTGAAGTCTAT GGCTACGCGGTCGTTGAAATGGATTCTGGTATTTTAAAAGTCATTAAAGATAAAGATGCGAAAACGTCGGCAGTTCCTGT TCTGGGAGCAAAAGATAACATAACGGGTGATGCGGTAATTACTCGTGTTATTGCGGTTCGTAATGTCTCTGTACGTGAGC TTTCACCTTTATTACGTCAGCTGAATGATAATGCGGGCGCGGGTAATGTGGTTCATTACGATCCGGCGAACATTATTATG ATCACGGGTCGTGCGGCGGTGGTTAATCGCCTTGCTGAGATTATTGAACGAGTCGATCAGGCGGGTGATAAAGAAGTTGA AGTGGTTGAGCTTAAAAATGCATCGGCGGCCGAGATGGTTCGTATTGTTGATGCTTTGAATAAAACAACGGAAGCAAAAA ACACTCCGGCTTTCTTACAACCAAAATTGGTTGCCGATGAGCGAACTAACTCAGTATTAATTTCTGGGGATCCTAAAGTT CGCCAACGATTGAAAAAATTAATTAAGCAACTTGATGTAGAAATGGCAACGAAAGGCAATAACCAAGTGGTTTACTTACG CTATGCCAAAGCAGAAGATTTAGTTGATGTGCTTAAAGGGGTTTCTGACAATCTAGAAGCCGGTAAAGGAAGTGGCAAGC AATCGGGTTCAAGTAATCGTGGTAATGTCATGATTTCAGCTCATGCGGATACTAATGCGATCATTATCACTGCACCGCCA GATATTATGCGTGCAGTGAAAGATGTGATTGCTCAATTAGATATCCGTCGTGCTCAAGTATTAATTGAAGCGCTGATAGT CGAAATGGCGGAAGGTGATGGCGTTAATCTTGGTGTGCAATGGGGTAATTTAAAAACCGGTGCAATGATCCAATACAGCA ATACGGGGGCCTCAATTGGCGGCACCATGGTGGGCTTAGAAGAAGCTAAAGACAGCACCACGACAACCGCTGTTTATGAT AGCGATGATAATTTCCAAAGAAATGAAACCACAACAGAAGAGGGTGATTACGGTGCACTTGCTTCTGCGCTTGGTGGTGT TCAAGGCGCGGCGGTTAGTATTATGATGGGGGATTGGACTGCGTTGATAACGGCGGTATCGACTGATTCGAATTCAAATA TTCTGTCATCACCAAGTATTACTGTCATGGATAATGGTGAAGCGTCATTTATTGTCGGTGAAGAAGTTCCTGTATTAACA GGGTCTACCTCTGGTTCAAATAACGAGAACCCATTCCAAACCGTTGAACGTAAAGAAGTGGGTATTAAGCTTAAGGTGGT CCCTCAGATTAATGAAGGGAACTCGGTTCGTTTGGATATTGAACAAGAAGTGTCTAATGTATTGGGTGCGAATGGGGCGG TTGATGTTCGTTTTGCTAAGCGCCAGTTAAGTACGTCGGTCATGGTAGAAGATGGCAAAATGTTAGTACTGGGTGGTTTG ATTGATGAACGAGCGATGGAAAGTGAATCAAAAGTTCCATTCCTTGGTGATATTCCGATTTTAGGCTATTTATTCAAATC AACCAGCACTCAAGTTGAAAAGAAAAATTTAATGATATTCATTAAACCAACCATTATTCGTGATGGCATGACATCGGATG GTATTACTCAGCGTAAATACAATTATATTCGTGCAGAGCAACTATATAATGCACAGAAAGGCTTGAAGTTTATGGATGAT ACGAATATTCCGGTGTTACCAACATTTGATGAAGGCATAAAACACCCCGCTGAAATTCAAGCGTTCTTTGAACAGTTTGA TGATGAACATAAGGATAAGGGAAAATAA Protein sequence : MGKGALLLASSMVWTSAIANDFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKVDVRSYDLLNEEQYYQFFLSVLEVY GYAVVEMDSGILKVIKDKDAKTSAVPVLGAKDNITGDAVITRVIAVRNVSVRELSPLLRQLNDNAGAGNVVHYDPANIIM ITGRAAVVNRLAEIIERVDQAGDKEVEVVELKNASAAEMVRIVDALNKTTEAKNTPAFLQPKLVADERTNSVLISGDPKV RQRLKKLIKQLDVEMATKGNNQVVYLRYAKAEDLVDVLKGVSDNLEAGKGSGKQSGSSNRGNVMISAHADTNAIIITAPP DIMRAVKDVIAQLDIRRAQVLIEALIVEMAEGDGVNLGVQWGNLKTGAMIQYSNTGASIGGTMVGLEEAKDSTTTTAVYD SDDNFQRNETTTEEGDYGALASALGGVQGAAVSIMMGDWTALITAVSTDSNSNILSSPSITVMDNGEASFIVGEEVPVLT GSTSGSNNENPFQTVERKEVGIKLKVVPQINEGNSVRLDIEQEVSNVLGANGAVDVRFAKRQLSTSVMVEDGKMLVLGGL IDERAMESESKVPFLGDIPILGYLFKSTSTQVEKKNLMIFIKPTIIRDGMTSDGITQRKYNYIRAEQLYNAQKGLKFMDD TNIPVLPTFDEGIKHPAEIQAFFEQFDDEHKDKGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-163 | 54 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-172 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| epsD | YP_002264253.1 | general secretion pathway protein D | VFG2047 | Protein | 6e-160 | 53 |
