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Name : pilB (VSAL_I2630) Accession : YP_002263969.1 Strain : Genome accession: NC_011312 Putative virulence/resistance : Virulence Product : type IV pilus assembly protein PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2845569 - 2847260 bp Length : 1692 bp Strand : + Note : - DNA sequence : ATGCACACCAACCTAGCTTCAATCTTGCGTCAAGCTGAACTCATCAGCTTGACGCAAGAAAATACCATTATCGAACACGT TCAATCAGGGGCACACACTGTGCCTTCTGCGCTTTTAGCTGCTCATATTTTTACACCTGATGAATTAATCAGTCATCTTT CTCAAATTTTTGGTTTGGATGTCATTAATGTCGCTCAATATGATTACGCCACGTGCTGTCAAAAATTAGGACTAAGAGAG CTCATAACCCAACATCAAGCATTGCCGATTCATTATGATCACGGCTTGATTCGACTCGCAGTGAGTGATCCAAGTATTGC TCAAATTGAGGATGATTTTCGTTTCACTACCAACAAACAAATTGAATTAGTGTTAGCTGACGAAGGACAGCTTCAAGCGG CCATTCGGCGTCTTTATGGGAAAGGGTTATCGGATTCACTGCCATCACAAAATAAAGAAATCACCCAAGATGAGCTCGCA TCACTGGTTGATATATCAAATGATGAAATGGTATTCACAGAAGATCTCAGCCAAGACGACGCCCCGGTTACCCGTTTTAT AAACCAAATATTACTAGAGGCCGTTCGAAAAGGCGTTTCTGATATTCACTTTGAACCTTATGAAGAAACTTATCGTGTGC GTTTTCGTTGTGATGGGATTTTAGTAGAGAACAGTAGTCCTTCTTCTCATTTAAGTCGTCATCTTTCAGCCCGCTTAAAA ATCATGGCAAAACTTGATATCGCAGAGCGACGATTACCACAAGACGGACGCATCAAACTTAAACTGAACAGCGAAGTCTC CATTGATATGCGCGTGTCCTCTCTTCCTACGTTATGGGGAGAGAAGATTGTTCTTCGATTATTAGACAGCAGCGCGGCCA GTTTGGATATCGACAAACTCGGCTACAGTGACGCCCAAAAAGAGTTATACCTAACGGCATTAAAACGCCCTCAAGGCATG ATCTTAATGACGGGCCCGACCGGCAGTGGCAAAACCGTATCTCTTTACTCTGGCCTAAACATTTTAAATACGACAGAAAA AAACATCTCCACCGCAGAAGATCCTGTCGAAATAAATCTGAATGGCATTAACCAAGTTCAAGTAAACCCTAAAATTGGAT TTACCTTTGCTTACGCCTTGCGATCATTTCTTCGTCAAGATCCCGATATTGTAATGGTCGGAGAGATCCGAGATCTAGAA ACAGCCGAAATCGCAGTAAAAGCCGCACAAACTGGGCACTTAGTTCTTTCAACACTTCATACCAACTCAGCGGCAGAAAC AGTGGTACGTTTAGGAAATATGGGGATCGAGAATTTTAACCTTGCCTCCTCTCTTACTCTTATCATTGCTCAACGATTAG CAAGAAGGCTTTGCCCTCATTGCAAAGCTATCGATCCATTAACCCCAGAGATCAGAGAAGAATATGGTATTGATTTATTA GGCACTGTTTTTCAAGCGCACACTGAAGGCTGTAATGAATGTACGCATGGCTATTCAGGGCGAATTGGTATTTACGAAGT GATGCCCTTTACCCGAGAGCTTTCCATTGCGATTTTAAAAGGCGCAACGGTAAGACAGATTGAACAACTTGCTATCAAGC AAGGCATGGATAATTTAGCCACATCAGGAATTAAACGCCTCGAAGATGGTACAACCAGCTTACAAGAATTAACTCGTGTT CTGTATTTTTAA Protein sequence : MHTNLASILRQAELISLTQENTIIEHVQSGAHTVPSALLAAHIFTPDELISHLSQIFGLDVINVAQYDYATCCQKLGLRE LITQHQALPIHYDHGLIRLAVSDPSIAQIEDDFRFTTNKQIELVLADEGQLQAAIRRLYGKGLSDSLPSQNKEITQDELA SLVDISNDEMVFTEDLSQDDAPVTRFINQILLEAVRKGVSDIHFEPYEETYRVRFRCDGILVENSSPSSHLSRHLSARLK IMAKLDIAERRLPQDGRIKLKLNSEVSIDMRVSSLPTLWGEKIVLRLLDSSAASLDIDKLGYSDAQKELYLTALKRPQGM ILMTGPTGSGKTVSLYSGLNILNTTEKNISTAEDPVEINLNGINQVQVNPKIGFTFAYALRSFLRQDPDIVMVGEIRDLE TAEIAVKAAQTGHLVLSTLHTNSAAETVVRLGNMGIENFNLASSLTLIIAQRLARRLCPHCKAIDPLTPEIREEYGIDLL GTVFQAHTEGCNECTHGYSGRIGIYEVMPFTRELSIAILKGATVRQIEQLAIKQGMDNLATSGIKRLEDGTTSLQELTRV LYF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-76 | 48 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-76 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_002263969.1 | type IV pilus assembly protein PilB | VFG0112 | Protein | 1e-115 | 52 |
| pilB | YP_002263969.1 | type IV pilus assembly protein PilB | VFG2048 | Protein | 7e-77 | 50 |
| pilB | YP_002263969.1 | type IV pilus assembly protein PilB | VFG1880 | Protein | 1e-104 | 48 |
| pilB | YP_002263969.1 | type IV pilus assembly protein PilB | VFG1876 | Protein | 1e-72 | 47 |
| pilB | YP_002263969.1 | type IV pilus assembly protein PilB | VFG0233 | Protein | 6e-96 | 44 |
| pilB | YP_002263969.1 | type IV pilus assembly protein PilB | VFG0182 | Protein | 7e-77 | 44 |
