Gene Information

Name : int (VSAL_I2480)
Accession : YP_002263830.1
Strain :
Genome accession: NC_011312
Putative virulence/resistance : Unknown
Product : integrase, phage family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2654415 - 2655656 bp
Length : 1242 bp
Strand : +
Note : -

DNA sequence : 
ATGGCATTAAAGACAACTCGCTTAAATAATAAACAAATTGATAATGCAAAAGAACGAGAGAAAGATTATGTCCTCTCTGA
TGGTGAAGGTCTTCAATTACGAATTCGTACTAATGGTTCTAAACTATGGAACTTCAACTACATTCATCCTCAAACTAAAA
AACGATTAAATATGGGGCTAGGTTCTTACCCTTCACTTAGTCTTGCGAATGCCAGAAAGCTAACCGTGTCTGCAAGAGAG
TTAGTTGCGCAAGGTATAGACCCTAAAGAACATCGTGATGAGAAAAAACACCAAGACCTGATAATTCATGAACATACTTT
TTTTAATGTTGCTACTGAATGGTTTGAGCGTAAGAAAGATGACATCACTGTAGATTATGCTCAAGACGTATGGCGATCTT
TAGAGCTACATATATTCCCTATACTTAAAAGTACACCTGTATCTCAAATTACAGCACCAATGATTATTGAATTACTTCGA
CCAATTGAAGCGAAAGGAAGTTTAGAAACAGTTAAACGACTGACTCAACGATTAAATGAGATCATGACCTATTCAGTAAA
CTGTGGGCTTATTCATGCTAACCCTCTTGCAGGGATCAAAGCTGCTTTTAAGAAACCCAAAAAAGAAAATATGGCGGCTC
TTAAACCTGATGAGTTACCAGAACTTATGATAGCCATTGCTAATGCTTCTATTAAGCGTACTACTCGTTGTTTAATTGAA
TGGCAACTTCATACAATGACTCGACCATCAGAAGCCGCTGGAACACGTTGGGAAGAAATAGATTTAGAGAAAGGAATTTG
GACAATTCCACCAGAGAGAATGAAAAAGCGTAGGGAACATCGTATACCTTTAACTGCTCAAGCTCTTTCTTTACTAGAAG
TTATGAAACCTATTAGTGCTCATAGAGAATTTGTATTCCCTTCAGATAGAGCACCATTAAAACCATCAAATAGCCAAACA
GCAAATATGGCAATAAAACGTATGGGTTTTGCTGGTAGGTTAGTAAGTCATGGATTACGTTCAGTAGCCAGTACTACGCT
AAACGAACAAGGCTTTGAATCAGACCTAATTGAAGCGGCTCTTGCCCACGTAGATGACAGTCAAGTACGTGCGGCTTATA
ACCGTACTGATTATCTTGAACGAAGAATACCGATGATGAAGTGGTGGAGTGGACATATTGAGGAAGCATCGAAAGGAAGT
TTATCTATATCAGGAATGAAGTGTTTATCTTTGGTTGGATAA

Protein sequence : 
MALKTTRLNNKQIDNAKEREKDYVLSDGEGLQLRIRTNGSKLWNFNYIHPQTKKRLNMGLGSYPSLSLANARKLTVSARE
LVAQGIDPKEHRDEKKHQDLIIHEHTFFNVATEWFERKKDDITVDYAQDVWRSLELHIFPILKSTPVSQITAPMIIELLR
PIEAKGSLETVKRLTQRLNEIMTYSVNCGLIHANPLAGIKAAFKKPKKENMAALKPDELPELMIAIANASIKRTTRCLIE
WQLHTMTRPSEAAGTRWEEIDLEKGIWTIPPERMKKRREHRIPLTAQALSLLEVMKPISAHREFVFPSDRAPLKPSNSQT
ANMAIKRMGFAGRLVSHGLRSVASTTLNEQGFESDLIEAALAHVDDSQVRAAYNRTDYLERRIPMMKWWSGHIEEASKGS
LSISGMKCLSLVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 4e-146 72
int AAK20773.1 integrase Not tested VPI Protein 3e-146 72
int AAK20803.1 integrase Not tested VPI Protein 3e-146 72
unnamed AAA82714.1 integrase Not tested VPI Protein 3e-146 72
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 4e-146 72
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-109 53
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 1e-105 53
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 6e-106 53
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 6e-106 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
int YP_002263830.1 integrase, phage family VFG1092 Protein 2e-106 53