Gene Information

Name : fliQ (VSAL_I2297)
Accession : YP_002263659.1
Strain :
Genome accession: NC_011312
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 2471429 - 2471698 bp
Length : 270 bp
Strand : -
Note : with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGACCCCTGAAATGGCCATTGAGCTATTCCGCGGCGCACTGTACATGGTGCTTATCATGGTGTGTGCCATTATTATTCC
AAGCTTATTAATTGGTTTGGTGGTTGCGGTTTTCCAAGCGGCAACCTCTATCAATGAACAAACGTTGAGTTTCTTACCTC
GTTTGATCGTGACGCTATTATCATTAATGTTATTCGGACATTGGATGACGAGAATGTTGATGGAATATTTTTATGAGCTG
ATCGCTCGAATGCCGACGATACTTTATTAA

Protein sequence : 
MTPEMAIELFRGALYMVLIMVCAIIIPSLLIGLVVAVFQAATSINEQTLSFLPRLIVTLLSLMLFGHWMTRMLMEYFYEL
IARMPTILY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaQ AAS66866.1 SpaQ Not tested SSR-2 Protein 3e-07 41
spaQ YP_217808.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 4e-05 41
spaQ NP_457283.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 4e-05 41
spaQ NP_806492.1 virulence-associated secretory protein Virulence SPI-1 Protein 4e-05 41
spaQ NP_461810.1 needle complex export protein Virulence SPI-1 Protein 4e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ YP_002263659.1 flagellar biosynthesis protein FliQ VFG1260 Protein 1e-20 60
fliQ YP_002263659.1 flagellar biosynthesis protein FliQ VFG2015 Protein 4e-14 45
fliQ YP_002263659.1 flagellar biosynthesis protein FliQ VFG0550 Protein 1e-05 41