Gene Information

Name : fepC (VSAL_I0141)
Accession : YP_002261691.1
Strain :
Genome accession: NC_011312
Putative virulence/resistance : Virulence
Product : iron-siderophore ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 180647 - 181453 bp
Length : 807 bp
Strand : +
Note : Similar to Vibrio cholerae ATPase (viuC); length=279; id 49.802%; ungapped id 50.000%; E()=7.2e-40; 253 aa overlap

DNA sequence : 
ATGCAAAACAATAACGAAATAACCAAAACATTATCGGCTCATCACGTTTCATTAAGCTACAGTGAAGGGCAAATAATCAA
CCGCATGCAACTGGCTATTCCAGCTAAAAAACTGACAGTGATTCTTGGTCCAAACGGCTGTGGAAAATCGAGCTTACTCA
AAATGTTAAGTCGCATAAAACACCCCGATGAAGGGTGCATTCTTTTAGGTGAAGAGAACATTTTAAAAATGAACAGTAAG
ACACTCGCGCGTCAACTTGCTCTATTAGTTCAAAAGCCCGAATTACCTGAGGGGATAGAGGTTATCGAACTCGTCAGCCG
CGGGCGTTACCCACACCAAAAAATGTGGCAGCAATGGTCGCTAGATGATGAAACCGCCGTTCAAGAAGCGTTGATCGCCA
CAGGGTTAACCGAGTTAATACACCGTCCTGTTGCCAGCTTATCTGGCGGACAACAACAGCAAGTTTGGTTAGCAATGGTA
CTCGCTCAAAAGAGTAATATCTTAATGCTTGATGAACCAACCTCTTTTCTTGATATACGTGCGCAACTTTTAGTGATGAA
TTTTTGTCTGTCTCTACGAGATCAAGGAAAAACATTGGTGATGGTGCTGCATGATATTAATCAGGCCTTTAGATACGCCG
ACAATATCATCATGATGCACAAGGGGAAAATAGTGGCGGAAGGAAAACCTGAAGACCTCGCGAACCCCGACATTATTCAC
ACGATCTATGGGGTAAACACCACCATTATCACCGATCCAGAATCTCAAACCCCCATGATTATCCCCAAAAAAGATCCTTC
TATCTAA

Protein sequence : 
MQNNNEITKTLSAHHVSLSYSEGQIINRMQLAIPAKKLTVILGPNGCGKSSLLKMLSRIKHPDEGCILLGEENILKMNSK
TLARQLALLVQKPELPEGIEVIELVSRGRYPHQKMWQQWSLDDETAVQEALIATGLTELIHRPVASLSGGQQQQVWLAMV
LAQKSNILMLDEPTSFLDIRAQLLVMNFCLSLRDQGKTLVMVLHDINQAFRYADNIIMMHKGKIVAEGKPEDLANPDIIH
TIYGVNTTIITDPESQTPMIIPKKDPSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-52 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 9e-52 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-52 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-52 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-51 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-48 44
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-47 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-47 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_002261691.1 iron-siderophore ABC transporter ATP-binding protein BAC0164 Protein 2e-48 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_002261691.1 iron-siderophore ABC transporter ATP-binding protein VFG0925 Protein 1e-53 45
fepC YP_002261691.1 iron-siderophore ABC transporter ATP-binding protein VFG1042 Protein 2e-48 44