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Name : VSAL_I1353 (VSAL_I1353) Accession : YP_002262810.1 Strain : Genome accession: NC_011312 Putative virulence/resistance : Resistance Product : multi-drug efflux protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 1469371 - 1472448 bp Length : 3078 bp Strand : + Note : Similar to Ralstonia metallidurans Cobalt-zinc-cadmium resistance protein CzcA UniProt:P13511 (1063 aa) blastp scores: E()=2e-66 DNA sequence : ATGAGTCAAGAAAAGGGAATTGCAGCGTACTTTATTCAAAATAAAGTGATCAGCTGGATGTTGACTTTGATTTTCATTAT TGGGGGAACCTCTGCTTTCTTTGGCTTAGGGCGATTAGAAGATCCTGCGTTTACCATCAAAGATGCAATGGTTGTGACCA ACTATCCGGGTGCCACACCAGAGCAAGTTGAAGAGGAAGTGACGTATCCGCTTGAAAAAGCGATTCAACAACTTACCTAT GTTGATGAAGTGAATTCATTATCGAGTCGTGGTTTATCTCAAATTACGGTAACCATGAAGAATAATTATGGCCCTGATGA TTTACCACAAATTTGGGATGAACTGCGCCGAAAGGTAAATGACTTAAAACGTCAGTTACCGCCGGGAGTCGGAGAACCAT CCGTTATTGATGATTTTGGTGATGTATACGGTGTACTTCTTGCCGTTACAGGACAAGGGTATTCGTATAAAGAACTTCTT GATTATGTTGATTATTTACGTCGTGAATTAGAACTTGTTGATGGGGTAAGTAAAGTCTCAGTCTCTGGTGTTCAACAAGA GCAAGTCTTTATTGAAGCGTCACTAAAACGCATGACAAGCTTAGGTATTTCACCTCAAACACTCTACAGTTTACTTTCTG AGCAAAATACCGTTTCAAGTGCGGGTGCCGTAAAAATTGGTTCTGAATACATACAGATCCACCCAACGGGCGAGTTTCAA GATGTGTCGCAACTTGGTGATTTGATTATTACTGAAGGTGGAGCGCAAGGTCTTATTTATTTAAAAGATATTGCGACCGT AAAGCGAGGTTATGTTGAAGTACCAAGTAATTTAATTAACTTCAATGGTAATTTTGCACTCAATATGGGGATCTCATTTA GTGCGGGGGTAAACGTTGTTGAAATCGGTAAATTGGTTGATCAACGAATGTTGGAGTTAAAAAACCAACAGCCCATTGGT ATTGATATTTCTGAAATATACAGTCAGCCAAAAGAAGTTGATAAATCGGTGAGTGGTTTTGTGGTGAGTTTAGCGCAAGC CGTTGCCATCGTGATTATCGTTTTACTTTTCTTTATGGGCGTGCGTTCAGGCTTATTGATCGGATTAATTCTGTTAATCA CCGTCTGCGGTACGTTTGTTTTCATGAAGTACTTGGCCATCGATTTACAACGAATCTCATTAGGTGCGCTCGTTATTGCG CTAGGAATGTTGGTCGATAATGCCATTGTGGTGGTTGAAGGGATCCTCATCGGTATGCAAAAAGGCCGAACGAGGATGCA AGCGGCCACCGATATTGTTACGCAAACCAAGTGGCCCTTATTGGGCGCTACGGTTATTGCCGTGACAGCCTTTGCTCCAA TTGGTTTATCTGATGATGCAACGGGGGAATACTGTGGAACCTTGTTTACGGTTCTATTGATTTCATTAATGCTGAGTTGG TTTACTGCCATTTCTCTTACGCCATTCTTTGCGTCTTTATTCTTTAAAGAAACCGTTCAGGTTGAAGGGGAAAATAACGA AGATAAAGATCCGTACAATGGCATGATCTTTGTTATTTATAAGCGTTTTCTTGAGTTCTGTATGCGCTACTCAATCGCAA CGATGCTGATCCTTGTTGTTGCACTTGGTGGCAGCATGTATGGCTTTACCAAGGTTAAACAATCGTTCTTCCCATCATCA ACAACGCCAATTTTCTTGGTGGATGTATGGATGCCAGAAGGAACGGACATTCGCTCAACCAACAAGACGCTAAAAGAATT AGAAGATTGGATCTTAGAGCAGAAACACATTGATCATGTCACAACCACGGCGGGTAAAGGTTTACAGCGATTCATGTTGA CCTATGCACCAGAAAAGAGCTATGCCGCGTATGGCGAGATAATGACTCGTGTTGATGATTACAACGCATTGCTGGCATTA ATGGCTAAATTCCGTCAGCATATTGAAACTAATTATCCGCAGATCCAATACAAACTGAAGCAGATTGAATTAGGACCCGG TGGTGGAGCTAAAGTTGAAGCTCGCATTGTGGGTGCCGATCCAACCGTTCTTCGCAGTTTAGCCGCGCAAGTTATTGAAG TTATGCACAATGACCCATCAGCGACGAACATTCGTCATGATTGGCGTGAGCGAACTAAGGTATTAGAGCCTCAGTTTAAT GAGAGTCAGGCTCGTCGTTACGGCATCTCTAAAACTGATGTGAACGAACTGCTTGAGATGGCCTTTGCGGGTAAAGCGAT TGGTGTGTACCGTGATGGTACAACGTTAATGCCTATTGTGACGCGTTTACCTGAAAATGAACGTGTTGATATCAGCACGA TTGAAGGAATGAAGATCTGGAGCCCGGCATTATCATTGTACATCCCATTACAGCAAGTGGTATTGGGCTACGATGTCATT TGGGAAGATCCACTGATAGTGCGTAAGAACCGTAAACGTATGTTAACCATAATGGCTGATCCAGATATTCTAGGTGAAGA AACGGCGGCGACATTGCAAAAACGTTTGCAACCACAAATAGAAGCGATCGATTTCCCTACAGGTTACAGCTTAGAATGGG GGGGTGAATATGAATCATCACGTGATGCACAAGCGTCTCTGTTCCAAACCATGCCAATGGGGTATTTGTTCATGTTCCTA GTGACGGTGTTCCTCTTTAATAGTGTGAAAGAGTCCGTCATTGTGTGGTTAACCGTTCCATTAGCTCTCATCGGTGTAAC TACTGGCTTATTAGCACTTAATACCCCCTTTGGCTTCATGGCGTTATTAGGTTTCTTGAGCTTAAGTGGTATGTTACTGA AAAATGGCATCGTCTTACTCGACCAAATAGAGATAGAAATACATTCAGGTAAAGAACCGTATCATGCGGTGGTTGATGCG GCGTTAAGTCGTGTTCGTCCTGTATGTATGGCCGCAATCACAACCATTCTAGGTATGATCCCGTTATTGCCGGATACCTT CTTCAAACCAATGGCCGTGACCATTATGTTTGGTTTAGGGTTTGCAACCGTACTGACGTTGATTGTGGTTCCGGTGCTGT ATCGTATGTTCCATAAAATTAAGGTTGTAGAGTATTAA Protein sequence : MSQEKGIAAYFIQNKVISWMLTLIFIIGGTSAFFGLGRLEDPAFTIKDAMVVTNYPGATPEQVEEEVTYPLEKAIQQLTY VDEVNSLSSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKRQLPPGVGEPSVIDDFGDVYGVLLAVTGQGYSYKELL DYVDYLRRELELVDGVSKVSVSGVQQEQVFIEASLKRMTSLGISPQTLYSLLSEQNTVSSAGAVKIGSEYIQIHPTGEFQ DVSQLGDLIITEGGAQGLIYLKDIATVKRGYVEVPSNLINFNGNFALNMGISFSAGVNVVEIGKLVDQRMLELKNQQPIG IDISEIYSQPKEVDKSVSGFVVSLAQAVAIVIIVLLFFMGVRSGLLIGLILLITVCGTFVFMKYLAIDLQRISLGALVIA LGMLVDNAIVVVEGILIGMQKGRTRMQAATDIVTQTKWPLLGATVIAVTAFAPIGLSDDATGEYCGTLFTVLLISLMLSW FTAISLTPFFASLFFKETVQVEGENNEDKDPYNGMIFVIYKRFLEFCMRYSIATMLILVVALGGSMYGFTKVKQSFFPSS TTPIFLVDVWMPEGTDIRSTNKTLKELEDWILEQKHIDHVTTTAGKGLQRFMLTYAPEKSYAAYGEIMTRVDDYNALLAL MAKFRQHIETNYPQIQYKLKQIELGPGGGAKVEARIVGADPTVLRSLAAQVIEVMHNDPSATNIRHDWRERTKVLEPQFN ESQARRYGISKTDVNELLEMAFAGKAIGVYRDGTTLMPIVTRLPENERVDISTIEGMKIWSPALSLYIPLQQVVLGYDVI WEDPLIVRKNRKRMLTIMADPDILGEETAATLQKRLQPQIEAIDFPTGYSLEWGGEYESSRDAQASLFQTMPMGYLFMFL VTVFLFNSVKESVIVWLTVPLALIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEIHSGKEPYHAVVDA ALSRVRPVCMAAITTILGMIPLLPDTFFKPMAVTIMFGLGFATVLTLIVVPVLYRMFHKIKVVEY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VSAL_I1353 | YP_002262810.1 | multi-drug efflux protein | BAC0428 | Protein | 0.0 | 82 |
| VSAL_I1353 | YP_002262810.1 | multi-drug efflux protein | BAC0519 | Protein | 0.0 | 82 |
| VSAL_I1353 | YP_002262810.1 | multi-drug efflux protein | BAC0526 | Protein | 0.0 | 58 |
| VSAL_I1353 | YP_002262810.1 | multi-drug efflux protein | BAC0425 | Protein | 0.0 | 43 |
