Gene Information

Name : radC (VSAL_p840_33)
Accession : YP_002261523.1
Strain :
Genome accession: NC_011311
Putative virulence/resistance : Virulence
Product : DNA repair protein RadC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 33384 - 33848 bp
Length : 465 bp
Strand : -
Note : -

DNA sequence : 
ATGATTAGGAAGCATCTTATGTTTACTGAAAATGAAAAAACAACCCTTGCTCAAGCCGCTGCGATTATTGAAACAAAAAT
CCGTACGACGCCTGAGCTAACGACTTCTGATTTAGCCATTGAATTTTGTACTAATCGATTAGTACATAAAGAGCATGAAG
TGTTCGGTATTTTGTTATTGGATAATCAGCACCGTTTAATTGAGTTTGTAGAGCACAGTGTTGGGACGATCGATAGTGCG
TCAGTGTATCCACGAGAAGTGGTTAAATTAGCGTTACATTACAACGCTGCCGCCGTGATATTTACACACAATCATCCTTC
TGGCATTGCGGAGCCGAGTCAATCCGATCGAAAAATAACGGCTCGATTGTTGGATGCATTAGCATTAATTGACGTTAGAG
TGCTTGATCATTTTGTTATTGGGTGCGGTGAGACGGTCGCTTTCTCTAAAAGAGGATGGATTTAA

Protein sequence : 
MIRKHLMFTENEKTTLAQAAAIIETKIRTTPELTTSDLAIEFCTNRLVHKEHEVFGILLLDNQHRLIEFVEHSVGTIDSA
SVYPREVVKLALHYNAAAVIFTHNHPSGIAEPSQSDRKITARLLDALALIDVRVLDHFVIGCGETVAFSKRGWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 9e-31 55
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 9e-31 55
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 5e-31 55
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 6e-31 54
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 3e-23 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
radC YP_002261523.1 DNA repair protein RadC VFG1119 Protein 3e-31 55