Gene Information

Name : DICTH_0470 (DICTH_0470)
Accession : YP_002250352.1
Strain : Dictyoglomus thermophilum H-6-12
Genome accession: NC_011297
Putative virulence/resistance : Virulence
Product : ABC-type transporter ATPase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 463255 - 463914 bp
Length : 660 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
GTGATAAAAGTAGAGAATCTTTACAAGTATTATCCTATGGGTAAGGAAAAATATCCTGCCCTAAAAAATATTAATCTTTC
TATTAATAAAGGAGAGTTTGTAGCAATTATTGGACCTTCGGGATCAGGAAAATCTACTTTACTCAATATTATTGGAGGAC
TTGATAAACCATCCGAGGGAAAAGTATATGTGGATGGGCAAGATATTTTTAAATTAAATGATGCAAGAATTTCAAAGTAT
AGAAATGAAAAGATAGGTTTTGTCTTTCAGTTTTTCTATTTAGAGCCCACTTATACTGTATTAGAAAATGTCATGCTTCC
TCTAATTTTTTCAAAAAGCAATAGTAGAGAATTAAAAGCAAAGGAAGCTATTGAAAAAGTTGGATTAACTCATAAGATAG
GAAACAAGGGTAATGAACTTTCGGGTGGAGAAAGGCAAAGGGTTGCGATTGCAAGGGCTATAGTTAACAATCCTTCAATT
TTACTCTGCGATGAACCTACAGGAAATTTAGATTCTAAAACAGGGATTTCTATAATGAACCTTCTTAAGGCTCTCAATAA
AGAGGGAAAAACAATAGTGCTTGTTACCCATAATTTAGAATATTTGAGTTTTGTAGATAGAGTAATAAAGATAAAAGATG
GGGAGTTGGAGGTGAATTAG

Protein sequence : 
MIKVENLYKYYPMGKEKYPALKNINLSINKGEFVAIIGPSGSGKSTLLNIIGGLDKPSEGKVYVDGQDIFKLNDARISKY
RNEKIGFVFQFFYLEPTYTVLENVMLPLIFSKSNSRELKAKEAIEKVGLTHKIGNKGNELSGGERQRVAIARAIVNNPSI
LLCDEPTGNLDSKTGISIMNLLKALNKEGKTIVLVTHNLEYLSFVDRVIKIKDGELEVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-32 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-29 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DICTH_0470 YP_002250352.1 ABC-type transporter ATPase component NC_012469.1.7686878. Protein 5e-50 54
DICTH_0470 YP_002250352.1 ABC-type transporter ATPase component CP001581.1.gene598.p Protein 1e-39 45
DICTH_0470 YP_002250352.1 ABC-type transporter ATPase component NC_008702.1.4606598. Protein 5e-37 44
DICTH_0470 YP_002250352.1 ABC-type transporter ATPase component NC_012469.1.7685735. Protein 3e-39 43
DICTH_0470 YP_002250352.1 ABC-type transporter ATPase component CP001581.1.gene798.p Protein 3e-38 42
DICTH_0470 YP_002250352.1 ABC-type transporter ATPase component NC_012469.1.7686946. Protein 3e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DICTH_0470 YP_002250352.1 ABC-type transporter ATPase component VFG0869 Protein 2e-21 41