Gene Information

Name : DICTH_0426 (DICTH_0426)
Accession : YP_002250308.1
Strain : Dictyoglomus thermophilum H-6-12
Genome accession: NC_011297
Putative virulence/resistance : Virulence
Product : CapD protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 420442 - 422319 bp
Length : 1878 bp
Strand : +
Note : identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02629; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993

DNA sequence :
TTGAATGTAGATAAGTCTTCAAGAGTACCATTTTCAACTTTGATAAGAGTGATAATAGATTATAGTTTGTTTATATTTGC
CATATTTTTTTCTTTTTTAATAAGATTTGAGTTTGCCTTACCGCCCAATTATTGGAATATCCTTCTTCAGGCTATTTTTA
GAGAGCTGGCTATTTTTTTCTTTCTTTATACTTTTCTATTTAAACTTCATCGTACTTTGTGGGAATATTTTAGCTTAGAG
GCTTTAAAAGAATTAACTCTTGCCGTTACTTTAGAAAAAGTTATATTCTTCTTATCTCATTTACTTCTCCCAATTTCAGG
TCTTCCAAGGTCAATTGTAGTTATTTCCTATTTTACCTCTCTTTTGTTTTTATTCTCGGTGAGGGCTTTTTCTCGTTGGT
ATCATGAAAGTAGTAAAATAAAAAGCAAAAATATATATGCTTCACCTAAAAGGGTAGTAATTGTGGGGGCAGGAGATGCA
GGAGAGAAGATATTAAGGGAAATAAAAACTAATAGAGAGATAAATTATGAGGTAGCAGGGTTCTTGGATGATGATCCAAA
GAAGATTGGAAAGACTATTCATGGTGTGAAGATATTAGGTCCTATATCTTCCTTACCTAAGGTTGTAGTGGAGAAAAGAG
TTCAAGAAATTCTTGTTGCAATTCCATCTGCTCCCCCTTCTCTTTTAAGAAATATTGTAAGTATGACTTCTAAATTAAGA
ATTCCTGTAAAGACTTTACCAGGTATATGGGAACTTATAGATGGAAAAGTAACCATAAGCAAAATTAGAAATGTAAAAAT
AGAAGATCTTCTTGAAAGAGATGTTATAAATTTGGATTCTGAGAGAATAGGAGAATATTTAAGGGGTAAGAAAGTACTTG
TTACTGGAGCTGGAGGGTCTATAGGATCAGAAATTTGTAGACAAGTTGCAAGTTATAAGCCGAGAAAATTAATTCTTCTT
GGAAGAGGTGAAAATAGTATATTTAATATTGAATTAGAGCTTAAGAGTATCTATCCAAAGTTGGACATTAAGTCTTATAT
CGCAGATATTAGAGATAGAGATAGAATTTTTTATATATTTTCTGTAGAAAAGCCTGATATTGTATTTCATACTGCTGCCC
ACAAGCATGTGCCCTTGATGGAGGAAAATCCTGATGAGGCTGTATTTAATAATGTTTTTGGCACAATTAATTTAATGGAT
GCCTCTAAAGAGTATGGAGTAAGTAAATTTATATTTATCTCTACTGATAAGGCAGTGTATCCTTCAAACATAATGGGAGC
AACCAAAAGGGTAGGTGAGATTCTAATTAAATATTACAATTCTCATTCCAAAACAGAGTATATTGCAGTAAGGTTTGGAA
ACGTCTTAGGAAGTAGAGGAAGTGTACTGGAGGTATTTAGAAAACAACTTGAAAAAGGTGGTCCCATTACGGTTACTCAC
GAGGATATGGAAAGATACTTCATGACAATTCCCGAGGCTGTAGGCCTTGTACTTCAAGCAGGAGCTATAGGAAGGTCAGG
AGATCTTTTTGTTCTTGATATGGGAAAACCTATAAAAATCATTGATCTTGCCAGAAATTTCATAGAGCTTTCTGGTTATT
CTCTTGATGATATAGAAATAAAAATTACAGGCCTTCGTCCTGGAGAGAAGTTAAAGGAGGATCTTTGGGAAAAGGAAGAA
GTTGTGGAAAGAACAGAGCATCCTAAGATTTTGAGAATTTTAGCTGATAACAATATAGACTATTACTCTATAGGAGAAAA
AATTAAAGAGTTAGAATTAATAGCAGGAACAAGAGATAAAGAAAAAATATGGAAGGCTTTAAAAGAGATTGTGGAATTAA
GTAGAAAAAATTATAAGAGCAAAGAAGAGGTTGTATAA

Protein sequence :
MNVDKSSRVPFSTLIRVIIDYSLFIFAIFFSFLIRFEFALPPNYWNILLQAIFRELAIFFFLYTFLFKLHRTLWEYFSLE
ALKELTLAVTLEKVIFFLSHLLLPISGLPRSIVVISYFTSLLFLFSVRAFSRWYHESSKIKSKNIYASPKRVVIVGAGDA
GEKILREIKTNREINYEVAGFLDDDPKKIGKTIHGVKILGPISSLPKVVVEKRVQEILVAIPSAPPSLLRNIVSMTSKLR
IPVKTLPGIWELIDGKVTISKIRNVKIEDLLERDVINLDSERIGEYLRGKKVLVTGAGGSIGSEICRQVASYKPRKLILL
GRGENSIFNIELELKSIYPKLDIKSYIADIRDRDRIFYIFSVEKPDIVFHTAAHKHVPLMEENPDEAVFNNVFGTINLMD
ASKEYGVSKFIFISTDKAVYPSNIMGATKRVGEILIKYYNSHSKTEYIAVRFGNVLGSRGSVLEVFRKQLEKGGPITVTH
EDMERYFMTIPEAVGLVLQAGAIGRSGDLFVLDMGKPIKIIDLARNFIELSGYSLDDIEIKITGLRPGEKLKEDLWEKEE
VVERTEHPKILRILADNNIDYYSIGEKIKELELIAGTRDKEKIWKALKEIVELSRKNYKSKEEVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 4e-85 44
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-82 43