Gene Information

Name : argF (DICTH_1680)
Accession : YP_002251492.1
Strain : Dictyoglomus thermophilum H-6-12
Genome accession: NC_011297
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 1638198 - 1639127 bp
Length : 930 bp
Strand : -
Note : identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658

DNA sequence :
ATGGGTGATCTTAAGGGAAGGGATTTACTTTCTATTCTTGATCTTTCTAGAGAAGAGATAGAACAAATATTCCATTTGGC
TAAGAATTTAAAATTAGAATATTATGCTGGTAAGCGAATACATGATTATTTGAAAGGTAAAACAGTGGCTTTATTCTTTG
AAAAGCCTTCTACTAGAACAAGAATTTCTTTTGAGGTTGGCGTGCATCAATTAGGAGGTTATCCTTTGTATTTGAATGCT
CAAGAGATGCAACTAAAAAGAGGAGAAACTATAGCAGATACAGCAAGAGTGTTGGAAAGATATGTGGATGGTATAATGGC
GAGGGTTTATTCTCATGATACTCTCGTGGAACTTGCTCAGTATTCACGTATTCCTGTGATAAATGGCCTTTCTGATTTGG
AACATCCATGTCAGGTTATAGCAGATTATTTTACTATTATTGAGAAGAAGGGCTTTAAAAAGTTAAAAGTAGTATATCTT
GGGGATGGTAATAATGTGGCTAACTCACTAATTCTTGCAGGAGTAATGCTTGGAATGAATGTGGTTTGTTCTTCTCCTAA
GGAGTTTATGCCTCCTAAGAAGGTATTAGAAGAAGCTTTAGTTCTTGCTAAAAGGTATGGAGGAAGTATTGAGATTATAG
AGGATCCTAAAGAGGCAGTAAAAGATGCTGATGTACTTTATACCGATGTATGGGTAAGCATGGGGCAGGAAGATGAGAAG
GAAATAAGAAGAAGGGTTTTGCCTCCATATCAGCTTAATAAAGAATTACTTTCTTTAGCTAAAGAAGATGCTATTGTTAT
GCATTGTCTTCCTGCTCATAGAGGTGAAGAAATTACGGACGAGGTGATGGATGGACCTAACTCGGTAGTTTTTGATGAGG
CTGAAAATAGGCTTCATGTGCAAAAGGCAATAATGGCTTTATTAATATAG

Protein sequence :
MGDLKGRDLLSILDLSREEIEQIFHLAKNLKLEYYAGKRIHDYLKGKTVALFFEKPSTRTRISFEVGVHQLGGYPLYLNA
QEMQLKRGETIADTARVLERYVDGIMARVYSHDTLVELAQYSRIPVINGLSDLEHPCQVIADYFTIIEKKGFKKLKVVYL
GDGNNVANSLILAGVMLGMNVVCSSPKEFMPPKKVLEEALVLAKRYGGSIEIIEDPKEAVKDADVLYTDVWVSMGQEDEK
EIRRRVLPPYQLNKELLSLAKEDAIVMHCLPAHRGEEITDEVMDGPNSVVFDEAENRLHVQKAIMALLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-50 44
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-50 44
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-50 44
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-50 44
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-50 44
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-50 44
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 4e-50 42