Gene Information

Name : rplS (DICTH_1423)
Accession : YP_002251242.1
Strain : Dictyoglomus thermophilum H-6-12
Genome accession: NC_011297
Putative virulence/resistance : Unknown
Product : ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 1360941 - 1361297 bp
Length : 357 bp
Strand : -
Note : identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024

DNA sequence :
ATGGATCTTATAATTCAGAATTTAGAGAAGGAGTATATGAAAAAAGATATTCCTGAAATATGGCCAGGAGATACCGTAAG
AGTGCATTATCGTATAGTAGAAGGGGATAAAGAAAGGATACAAGTTTATGAGGGAGTCGTAATCGCCAAGAAGCATGGTG
GTATAAGAGAGACAATTACAGTAAGAAAGGTTGTTCAGGGTGTAGGAGTAGAAAGAATCTTTCCTCTCCATTCTCCTTTG
GTAGAGAAGATTGAGGTAGTGAGAAGAGGTAGAGTAAGAAGAGCAAAACTTTACTACTTAAGAGAGAGAAAGGGTAAGGC
TGCTAAGATAGCTGAGAGGGAAGAAAATGAAGGATAA

Protein sequence :
MDLIIQNLEKEYMKKDIPEIWPGDTVRVHYRIVEGDKERIQVYEGVVIAKKHGGIRETITVRKVVQGVGVERIFPLHSPL
VEKIEVVRRGRVRRAKLYYLRERKGKAAKIAEREENEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 6e-30 58
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 5e-26 55