Gene Information

Name : DICTH_1374 (DICTH_1374)
Accession : YP_002251193.1
Strain : Dictyoglomus thermophilum H-6-12
Genome accession: NC_011297
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1310075 - 1310962 bp
Length : 888 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGCAAGTCTTTACAGGAACAGATAAAGTAAAAAGAGGTTTAGCTCAGATGTTAAAAGGTGGAGTGATTATGGATGTAAC
TAACGCAGAACAGGCCGAAATTGCTGAGGAGGCCGGGGCTGTTGCAGTTATGGCTTTGGAAAGAGTTCCTGCTGACATAA
GAGCTCAGGGCGGAGTGGCAAGAATGGCAGATCCTAAAAAAATAAAAGAGATTATGTCAGCAGTTAGCATTCCGGTTATG
GCAAAAGTTAGAATTGGCCATTTTGTAGAGGCTCAAATTTTAGAGGCTCTTGGTGTGGATTTTATTGATGAAAGCGAAGT
GCTGACCCCTGCCGATGAAAAGTATCATATAAATAAACATTTATTCAAAGTTCCTTTTGTATGTGGCGCTAGGGATTTAG
GAGAAGCACTGAGGAGAATTGCAGAAGGCGCAGCTATGATTAGAACCAAAGGAGAAGCAGGTACCGGAAATGTGGTGGAA
GCTGTACGCCATATGAGGCAAATTATGGATGAGATAAGGGCTTTGGCTCTTCTTCCTGATGAAGAATTAGTAGCGAAGGC
TAAGGAACTTGGTGCTCCTCTGGAGCTTGTAATAGAGACTAAGAAATTGGGAAGACTTCCTGTAGTGAATTTTGCTGCTG
GTGGTATTGCTACTCCTGCTGATGCTGCTTTGATGATGCATCTTGGTGCTGATGGTGTGTTTGTAGGTTCTGGAATATTT
AAGTCTAAGGATCCTAGGAAGAGGGCAAGAGCTATAGTTCTTGCTGTGACTTATTATGATGATCCTTATGTCTTGGCCGA
GATCTCGGAGGATCTAGGGGAGCCTATGCCAGGTATTGATGTGAGAAAACTTTCTGAAACCGAATTATTACAGGTAAGAG
GTTGGTAA

Protein sequence :
MQVFTGTDKVKRGLAQMLKGGVIMDVTNAEQAEIAEEAGAVAVMALERVPADIRAQGGVARMADPKKIKEIMSAVSIPVM
AKVRIGHFVEAQILEALGVDFIDESEVLTPADEKYHINKHLFKVPFVCGARDLGEALRRIAEGAAMIRTKGEAGTGNVVE
AVRHMRQIMDEIRALALLPDEELVAKAKELGAPLELVIETKKLGRLPVVNFAAGGIATPADAALMMHLGADGVFVGSGIF
KSKDPRKRARAIVLAVTYYDDPYVLAEISEDLGEPMPGIDVRKLSETELLQVRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-74 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-74 68
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-74 67