Gene Information

Name : DICTH_1248 (DICTH_1248)
Accession : YP_002251076.1
Strain : Dictyoglomus thermophilum H-6-12
Genome accession: NC_011297
Putative virulence/resistance : Unknown
Product : single-strand DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1197043 - 1197483 bp
Length : 441 bp
Strand : -
Note : identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence : 
ATGCTGAACAAAGTTTTACTTATTGGACATTTAGTTAGAGATCCTGAGATGAGGTACACTCCGTCAGGTGTACCTGTGAC
CACATTTAGAATTGCTGTTAACAGGCCAAAGAACAGCAAGGGTGAGTCTACTGCAGATTTTATTGATATTGTAGCATGGA
GAAGATTGGCAGAAATATGTGGTGATTATCTTAAAAAGGGTAGGCTTGTAGCTGTCGAGGGAAGACTTAGAACAAGAACT
TATCAAACTCCTGATGGTCAAAGAAGAAGAGTTGTCGAAGTAGAGGCAATAAATGTCCATTTCTTGGGAAGAAAAAGTGA
AAATACTGAGAGCATCTCAATAGAAGAGCCTATTGAGGAGATTCCTGATGTAGATATAGAGAATGAGGAGGAGATATTAA
ACGAAATATTAGAGGAAAGCGAGGAGGAAGATAATGAGTAA

Protein sequence : 
MLNKVLLIGHLVRDPEMRYTPSGVPVTTFRIAVNRPKNSKGESTADFIDIVAWRRLAEICGDYLKKGRLVAVEGRLRTRT
YQTPDGQRRRVVEVEAINVHFLGRKSENTESISIEEPIEEIPDVDIENEEEILNEILEESEEEDNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-21 53
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-22 52
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 3e-22 51
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 5e-22 51
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-22 51
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 4e-18 49
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 1e-18 43
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 2e-18 43