Gene Information

Name : dnaB (DICTH_1244)
Accession : YP_002251072.1
Strain : Dictyoglomus thermophilum H-6-12
Genome accession: NC_011297
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 1193953 - 1195314 bp
Length : 1362 bp
Strand : -
Note : identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665

DNA sequence :
ATGAAAAATAAGGAGGATATTCTTGGAAGAGTACCCCCTCATAATGAAGAAGCGGAGCAGGCTGTACTTGGGGCGATGCT
TCTTTCAAGAGATGCTATAGCTAAGGTTATCGAAATATTAAATCCTGATAGCTTTTATTATGAGCATCATGGAATAATCT
TTAGAGTTATTGTAGAACTTTTCGAGAAAGGTCTTCCTGTAGATTTAGTTTCTGTGACTGAGGAACTAAGAAGTAGAAAT
CTTTTGGAAAGGGTAGGAGGGAATGTTTATATTGCTTCTTTGCTTGATGTGGTTCCAACTGCTGCGAATGTAGAGTACTA
TGCTAATATTGTGGCAGAAAAAGCACTTTTAAGAAGACTGATCTCAGCTGGTACTGAAATAGTTTCTTTAGGATATAGGG
AAAATGAAAACCCAGAATTATTGGTTGATAAGGCAGAACAATTGATTTTTGATATAGCTCAGCATCATAGATTTAGGACC
CTGGTTCCGCTGAGAGATGTGCTTGCAAAAAGTTTTAAAGAGATAGAAAGAATTCATCAAACAGGAAAGCCTTTTACAGG
TATTCCTACAGGATTTTGGGACTTAGATAGAAAGACAGGAGGTTTTCAGCCTTCAGATTTGATTATAGTCGCGGCTCGCC
CTGGAATGGGTAAAACTTCTTTTTGTTTGAATATTGCACAGCATGTGGCTTTAGAAGAGCATTTACCAGTAGCAATATTT
AGTCTTGAAATGTCTAGTTTTCAGTTGGCTTTAAGACTTTTAGGTTCTGAAGCTCAGATAGACATTCATAGGCTGAGAAC
GGGACAAATTCGGGAGCAAGAATGGCCAAAACTTGCTAGAGCTTTTGGGAAGTTAGCAGAGGCGCCTATTTTTGTGGACG
ATACGCCTGACTTAAATGTTATTGAGATGAGGGCAAGAGCAAGAAGGTTGAAGGCAGAAGTAGGGCTTTCTCTTATTATT
GTGGATTATCTACAGCTGATAAGACTTTTAGATAGGGATAAGAGTGAACATCAACAAATTTCTGAAATTTCTAGAGGGCT
TAAGTCTTTGGCGAGAGAACTTGAGGTTCCAGTTATTGCTATATCTCAGTTATCAAGAGCTGTGGAGACCAGAGCTGAAA
GGAGGCCTCAACTTTCAGATTTAAGAGGTTCAGGTGGGCTTGAACAAGATGCAGATGTGGTGATATTTATCTATAGAGAA
GGATATTATAAGGCTCAAGAGGCAGAGGTGGAGTCTGATTTACCTGAAGAGGTGGAGATAATAATAGCTAAACAGAGGAA
TGGTCCTACTGGAACAGTTAAGTTATTATTTATGAAGAATTCTACTTCCTTTAAGTCTTTAAGTCTAAGAGACGAAGTCT
AA

Protein sequence :
MKNKEDILGRVPPHNEEAEQAVLGAMLLSRDAIAKVIEILNPDSFYYEHHGIIFRVIVELFEKGLPVDLVSVTEELRSRN
LLERVGGNVYIASLLDVVPTAANVEYYANIVAEKALLRRLISAGTEIVSLGYRENENPELLVDKAEQLIFDIAQHHRFRT
LVPLRDVLAKSFKEIERIHQTGKPFTGIPTGFWDLDRKTGGFQPSDLIIVAARPGMGKTSFCLNIAQHVALEEHLPVAIF
SLEMSSFQLALRLLGSEAQIDIHRLRTGQIREQEWPKLARAFGKLAEAPIFVDDTPDLNVIEMRARARRLKAEVGLSLII
VDYLQLIRLLDRDKSEHQQISEISRGLKSLARELEVPVIAISQLSRAVETRAERRPQLSDLRGSGGLEQDADVVIFIYRE
GYYKAQEAEVESDLPEEVEIIIAKQRNGPTGTVKLLFMKNSTSFKSLSLRDEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 6e-65 41
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 6e-65 41