Gene Information

Name : DICTH_0121 (DICTH_0121)
Accession : YP_002250006.1
Strain : Dictyoglomus thermophilum H-6-12
Genome accession: NC_011297
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 136589 - 137287 bp
Length : 699 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGTTTATTCAAATCAAAGATCTCTCTAAGAGTTATCAGTTAGGACTAACTAAAATTAATGCTCTTAAAAGAGTTTCTAT
GGATCTTGAAAAGGGTAAAATCTATGTAATACTTGGGCCTTCAGGCTCTGGAAAGACCACTCTTCTTAATATTCTTGGAG
GAATTGATAAACCTGATGAAGGGAAAGTTATAGTTGAGGAAGAAGATATAACTAATTACGGTGATAAAGAGTTAACTAAC
TATCGTAGAAGGAAACTTGGTTTTATCTTTCAATTTTATAATCTTGTGAATTCTCTAACGGTCTTAGAAAATGTACTTTC
TACAAAATATCTCTCAGAGGATGGTTTAGATCCTAAAGAAGTACTTGAGATTGTGGGAATGTGGGAACATAAGGATAAAT
TTCCCTTTGAGCTTTCTGGAGGTGAACAGCAAAGAGTAGCTATAGCAAGGGCAGTAGTGAAAAATCCGGCTATAATTCTT
TGTGATGAGCCTACTGGTGCTCTTGATTTTGAAAATGCGAAAAGAGTACTTAAACTCCTTGAGGATATAAATAAAAGATA
TGGTACCACAATTATAATTGCTACTCATAATACTGCTATCGCTAAGATGTCTCACAAGATTATAAGGCTAAGAAGTGGTG
AGTTAGTTGAATATCAAGATAATCCATCTCCTGTACCTGCTGAGGAGGTGGTTTGGTAA

Protein sequence : 
MFIQIKDLSKSYQLGLTKINALKRVSMDLEKGKIYVILGPSGSGKTTLLNILGGIDKPDEGKVIVEEEDITNYGDKELTN
YRRRKLGFIFQFYNLVNSLTVLENVLSTKYLSEDGLDPKEVLEIVGMWEHKDKFPFELSGGEQQRVAIARAVVKNPAIIL
CDEPTGALDFENAKRVLKLLEDINKRYGTTIIIATHNTAIAKMSHKIIRLRSGELVEYQDNPSPVPAEEVVW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 43
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 4e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DICTH_0121 YP_002250006.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 7e-45 49
DICTH_0121 YP_002250006.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-32 42
DICTH_0121 YP_002250006.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-35 42
DICTH_0121 YP_002250006.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-25 42