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Name : DICTH_1041 (DICTH_1041) Accession : YP_002250890.1 Strain : Dictyoglomus thermophilum H-6-12 Genome accession: NC_011297 Putative virulence/resistance : Virulence Product : type IV pilus assembly protein PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1021184 - 1022869 bp Length : 1686 bp Strand : + Note : identified by match to protein family HMM PF00437; match to protein family HMM PF05157 DNA sequence : ATGAAGGAAAAAAAGCCCTTAGGTGAATATTTATTAGAGCAAGGGCTGATTACTAAAGAACAGCTAGAAAAAGCTCTTGA AGAGCAAAAAAAGACAGGAGCAAAACTTGGACAAATTCTTATAGAAAGAGGATATGTAAAACCAGAAGATATAGGAAAGG TTTTAGAAAAACAGAGCGAAATTCCATATATTTCACTGGCTGAAGTTCAGATAGATGAAAGGGTTGCAAAGAGTTTTCCA GAGAATCTATTAAGAAGATATAAATTTATTCCCATTAAAAGAGAGTCTGGCGTCTTACATATAGCAGTTGTACCCCCTAT AGATCCTGTGGTAATAAATGAAATAAGAAGAATTGTTAAATCTCCTATAAGAATTTTTATCATTACAGATAAGGAGTTTA ACCAAGCAATATCTAAACTTTTTCCCTTAGAAAAAGCAACCCTTACAGTAGTACAAGACTTTCAAAAAACTGCTCCAGAA CCTACTGTAGAGATACCCCCAGCCTTAGGGGTAGAGGAAGCCCCAATTGTAAAACTTGTATCATCCATAATAAATGAAGC CATAAACAGAAATGCCAGTGATATTCACTTAGACCCTCAAGAAAAGGAAATGAAGGTAAGATACAGGATACATGGAATAC TCTATGATATAATGACCATTCCTAAAGAGGTTCAAGATGCGGTAGTTACAAGAATAAAAGTAATCTCTGGAATGGATATA GCAGAAAAAAGAAGACCTCAAGATGGTAGAGCTACCTATAGATATGAAAATAGAGTTTTTGACCTGCGTGTAGCTTCTAT TGGGGCTACTTATGGTGAAATGGTAGTAATAAGGCTTTTAGATAAAACCAAGGTACTTATCGAACTTGATAGATTAGGAA TGTCAGATTACGATTTGAAAGTTTTTGAAAATCTTATAAAGAGACCTTTTGGTATGATCCTTGTGACAGGTCCTACAGGA AGTGGAAAAACTACTACTTTGTATTCTGCTCTTAATGTATTAAACAAACCTGAAGTGAATATAATCACCCTTGAAGATCC TGTAGAATATGCTCTCCCGGGCATAAATCAAATTCAGATACAACCCCGAATAGGTATAGATTTTGCAGCAGGACTTAGAA ATATTCTAAGACTTGATCCCAATATAATCATGGTAGGCGAAATACGAGATACCGAAACCCTAAATACCTCCATAGAAGCA GCCTTAACAGGGCATTTGCTCTTGAGTACTTTCCATGCTAATGACTCTGCAAGTGCTATTGCAAGGCTTGTTCAAATGGG AGTTGAGCCTTTTCTTATAGCCTCCTCTCTAATTGGCATCGTAGCACAGAGATTAGTAAGAACTATATGCCTTTCCTGTA AAGAAGAATATACCCCATCTCCTGAGGAGATTGAAGAACTTGGTCTAACAAAAGAGGAAGGTAAAAATATAACTCTTGCT CGAGGAAAGGGTTGTCTCTTCTGTAATTATACTGGATATACAGGAAGAACAGGAGTTTTTGAAATTCTCAGAGTTACCAA AAATATAAGAAGTTTGATAAATTCTGGTGCATCCATAGACGAGATAAGAAATACTGCCCTTAAAGAAGGAATGAAAACCC TATTTATGAATGCTAGAGAAAAAGTTCTAAACAAAATCACTACTATTGATGAGATAAGAAGAGTAATAGCCTGGGAGGAG AGTTGA Protein sequence : MKEKKPLGEYLLEQGLITKEQLEKALEEQKKTGAKLGQILIERGYVKPEDIGKVLEKQSEIPYISLAEVQIDERVAKSFP ENLLRRYKFIPIKRESGVLHIAVVPPIDPVVINEIRRIVKSPIRIFIITDKEFNQAISKLFPLEKATLTVVQDFQKTAPE PTVEIPPALGVEEAPIVKLVSSIINEAINRNASDIHLDPQEKEMKVRYRIHGILYDIMTIPKEVQDAVVTRIKVISGMDI AEKRRPQDGRATYRYENRVFDLRVASIGATYGEMVVIRLLDKTKVLIELDRLGMSDYDLKVFENLIKRPFGMILVTGPTG SGKTTTLYSALNVLNKPEVNIITLEDPVEYALPGINQIQIQPRIGIDFAAGLRNILRLDPNIIMVGEIRDTETLNTSIEA ALTGHLLLSTFHANDSASAIARLVQMGVEPFLIASSLIGIVAQRLVRTICLSCKEEYTPSPEEIEELGLTKEEGKNITLA RGKGCLFCNYTGYTGRTGVFEILRVTKNIRSLINSGASIDEIRNTALKEGMKTLFMNAREKVLNKITTIDEIRRVIAWEE S |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-80 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-80 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DICTH_1041 | YP_002250890.1 | type IV pilus assembly protein PilB | VFG1880 | Protein | 6e-76 | 46 |
| DICTH_1041 | YP_002250890.1 | type IV pilus assembly protein PilB | VFG0182 | Protein | 3e-85 | 43 |
| DICTH_1041 | YP_002250890.1 | type IV pilus assembly protein PilB | VFG2048 | Protein | 6e-80 | 41 |
