Gene Information

Name : hemC (THEYE_A0717)
Accession : YP_002248559.1
Strain : Thermodesulfovibrio yellowstonii DSM 11347
Genome accession: NC_011296
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 708504 - 709439 bp
Length : 936 bp
Strand : +
Note : identified by match to protein family HMM PF01379; match to protein family HMM PF03900; match to protein family HMM TIGR00212

DNA sequence :
TTGACAGTGAAGAGGAATAAAATAGTTATTGGCAGTCGTGGAAGCAAGCTTGCAATGTGGCAGGCAAATTGGGTTAAGGA
CAAACTTCAAACACTTTATCCTGAATTAAAAGTTGAAATTGAAAAGATAAAAACAACAGGTGATAAAATTCTTGATGCAC
CTTTGGCAAAGATTGGTGGCAAGGGTTTATTTGTAAAAGAGATAGAAGAGGCTTTACTTTCAAAAAGAGTTGACCTTGCT
GTACACAGCATGAAAGATGTTCCAACAGAAATTCCGGAAGGGCTGCAAATCTCAGCTATTTGTGAAAGAGAAGACCCAAG
AGATGCTTTTATAAGCAAGGATGGAGTTTTACTCAATGAACTACCTCAAGAAGCTGTATTAGGGACAAGCAGCCTTAGAA
GAACTGTTCAGTTAAAAGCTTTAAGAAATGACTTAGTAATAAAGCCTTTAAGGGGAAATGTGGATACAAGAATAAGAAAG
CTTAAAGATGGTGAGTTTCAGGCAATTGTTCTTGCCATGGCTGGAGTTAAAAGAATGGGAGTTGAAAACTTAGTTACGCA
AGCCTTTTCAGAAGATTTAATGATTCCTGCAATTGGGCAAGGAGCAATAGGGATTGAAACAAGAGTGGATGATGATTTTG
TAAATGAACTGATAAAGCCTCTTAATCATGAAGAAACAGCTATTTGCATTCTTGCAGAAAGAGCTTTTCTCTCAGTGATG
GGAGGAGGCTGTCAGGTTCCTCTTGCCTGCCATGCAAGGATTGTAAATAACAGTCTTAAAATAGTGGGTATGATAGGTGA
CCCTGAGGGCAAAATGCCAGTTATAAAAGGCTTCCGTGAAGGAAGTTTATCTCAAGCGCAAAGTCTTGGTGTAGAGCTTG
CAAATGAATTACTTCACAGAGGTGGCAAAGAAATACTTGAAAAGGTCTATAAATAA

Protein sequence :
MTVKRNKIVIGSRGSKLAMWQANWVKDKLQTLYPELKVEIEKIKTTGDKILDAPLAKIGGKGLFVKEIEEALLSKRVDLA
VHSMKDVPTEIPEGLQISAICEREDPRDAFISKDGVLLNELPQEAVLGTSSLRRTVQLKALRNDLVIKPLRGNVDTRIRK
LKDGEFQAIVLAMAGVKRMGVENLVTQAFSEDLMIPAIGQGAIGIETRVDDDFVNELIKPLNHEETAICILAERAFLSVM
GGGCQVPLACHARIVNNSLKIVGMIGDPEGKMPVIKGFREGSLSQAQSLGVELANELLHRGGKEILEKVYK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 8e-68 51
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 8e-68 51