Gene Information

Name : lspA (THEYE_A0655)
Accession : YP_002248497.1
Strain : Thermodesulfovibrio yellowstonii DSM 11347
Genome accession: NC_011296
Putative virulence/resistance : Unknown
Product : signal peptidase II
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 651145 - 651588 bp
Length : 444 bp
Strand : +
Note : identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077

DNA sequence : 
ATGTCATTAAAGCTTTATAAAACTTCTATATCAATTTTTCTAATTCTTTTGATTGACCAGATTACAAAATATCTTGCTAT
TAAATTTCTATCTCCTGATGGAATAGTGAAGCTATTACCTTTTTTAAATTTAGTTTATGTTGAAAATACAGGCACTGCTT
TTGGAATGTTTAAATTTCTCGGTTCAGGATTTTTTATAATTATAGCTTTAGTAGTTACAGGGTTTCTTGTTTATATGTAT
TTCAAAGACACTCAAAACTGGTTTATTTATTCTCTTATAATTGCAGGAGCATTAGGGAATATCATTGATAGGCTGATTTA
TGGGTATGTTATAGATTTTATAGACCTTCATCTGAAAAATCTTCACTGGCCAGCCTTTAATGTAGCTGATTCAGCTATAA
GTATAGGAATTGTTCTTTTTGTCTATAAGAACTTAAAAAAATGA

Protein sequence : 
MSLKLYKTSISIFLILLIDQITKYLAIKFLSPDGIVKLLPFLNLVYVENTGTAFGMFKFLGSGFFIIIALVVTGFLVYMY
FKDTQNWFIYSLIIAGALGNIIDRLIYGYVIDFIDLHLKNLHWPAFNVADSAISIGIVLFVYKNLKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 5e-14 42
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 5e-14 42
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 5e-14 42
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 8e-14 42
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 8e-14 42
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 7e-13 42
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 7e-13 42
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-12 42
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 5e-12 41