Gene Information

Name : THEYE_A0479 (THEYE_A0479)
Accession : YP_002248324.1
Strain : Thermodesulfovibrio yellowstonii DSM 11347
Genome accession: NC_011296
Putative virulence/resistance : Virulence
Product : CMP-NeuNAc synthetase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2089
EC number : -
Position : 462322 - 463359 bp
Length : 1038 bp
Strand : +
Note : identified by match to protein family HMM PF03102; match to protein family HMM PF08666

DNA sequence :
ATGGAAATAACAATAGGTAAAAGAAAAATTGGTTATGAACATCCTGTTTATATTATTGCTGAAGGTTGTGATAATCATCT
TGGCAATCTGGATGTTGCAAAGGAGATGGCAAGGCAGGCAAAACTCGCAGGTGCTGATGCCATTAAATTTCAGCATCATA
TACCTGATGAGGAGATGCTTCCTGATGTCCCTATGTCAGACAATTTCAATATGCCACTTTATGAATTTCTCAAAAAATAT
GCCTTAACACTTGAACAGCATATAGAATTAAAAAAATACTGTGAATCAATCGGGATACAATATCTATGTACTCCTTTCAG
CTGGAAAGCTGCTCAGGAATTAAATGAAATTGGCGTTGAAGCTTTCAAAATTGGTTCTGGGGAAATGACTGACATTCCAA
CTCTGAAAAAAATGGCTTCTTTTGGTAAACCCATGATAGTCTCTACAGGAATGAGCACTTTTGAAGAAATTGATAGAACT
TATAAATTATTGAGAGACATGAATGTTCCTCTGGTGCTTATGCATTGTGTTTCTGAGTATCCACCTGTTTATCATGATAT
CAATCTGAAAGTTATAAATCAAATGATTGAGCGTTATCCTGAAGCAATTATTGGACATTCTGACCATACACCTGATTTAT
TTACCTGTTTTGCAGCTGTAGCACTCGGTGCAAAGGTTATTGAAAAACATGTAATCCTTGACAAAAGACAGCCCGGTCCA
GACCAATCTGTATCTATTGATTTTTATGAACTGGCAACATTGGTGGAAGGTATTCGTAAGATTGAATCAGCTATGGGTAA
TGAGAAAATTATACATGAAAGAGAAAAACAAATCAGAAAGTGGGCATTCAGAAGCATAGTATCTTTGAGTGATATTAAAG
CAGGGGAAATAATAACAGAAGATATGATATGGTCAAAGAGGCCTGGGACAGGAATTCCTTCATATTTTATGGATAAAATT
ATCGGAGCAAAAGCTAAGCGATTTATACCTGCAAACACTTTACTCTCATGGGATGATATTGAGATAGAAAAGGAATAA

Protein sequence :
MEITIGKRKIGYEHPVYIIAEGCDNHLGNLDVAKEMARQAKLAGADAIKFQHHIPDEEMLPDVPMSDNFNMPLYEFLKKY
ALTLEQHIELKKYCESIGIQYLCTPFSWKAAQELNEIGVEAFKIGSGEMTDIPTLKKMASFGKPMIVSTGMSTFEEIDRT
YKLLRDMNVPLVLMHCVSEYPPVYHDINLKVINQMIERYPEAIIGHSDHTPDLFTCFAAVALGAKVIEKHVILDKRQPGP
DQSVSIDFYELATLVEGIRKIESAMGNEKIIHEREKQIRKWAFRSIVSLSDIKAGEIITEDMIWSKRPGTGIPSYFMDKI
IGAKAKRFIPANTLLSWDDIEIEKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
siaC NP_273132.1 polysialic acid capsule biosynthesis protein SiaC Not tested IHT-A Protein 3e-52 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THEYE_A0479 YP_002248324.1 CMP-NeuNAc synthetase VFG0252 Protein 1e-52 42