Gene Information

Name : THEYE_A0030 (THEYE_A0030)
Accession : YP_002247884.1
Strain : Thermodesulfovibrio yellowstonii DSM 11347
Genome accession: NC_011296
Putative virulence/resistance : Resistance
Product : cation/acetate symporter ActP
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 31548 - 33086 bp
Length : 1539 bp
Strand : -
Note : identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813

DNA sequence :
ATGCAAACTGTTCTTGGACAACCAACACTGACAGGAATATTTTTCTTTTTGCTTTTCGTTGCCGCAACATTGTATATAAC
ATATTGGGCAGCAAAAAGAACAAGAACAACAGCAGAGTTTTATGCAGCAGGAAGAAGTATAACAGGACTACAGAATGGTC
TTGCTCTCGCTGGAGATTATATGTCTGCAGCAAGTTTTCTCGGAATTGCTGGACTGGTTTCATTGAAAGGATATGATGGT
TTAATATACGCAGTAGGCTGGCTTGTTGGGTGGCCTATTGTAATGTTCTTAATTGCAGAACCGCTCAGAAATCTTGGTAA
ATATACCTTTGCAGATGTTGTTGCATACAGACTTAGACAGAGACCTATCAGAACAGCTGCTGCAACAGGAGCTTTAATAA
CTGTCCTTTTTTATTTAATTGCTCAGATGGTCGGTGCAGGTTCTTTAATAAAATTAATGTTTGGACTTCCTTACGAATTG
GCAATAATTATAGTAGGGTGTCTAATGATAGCTTATGTTTTATTCGGAGGAATGCTTGCAACAACTTGGGTTCAGATTAT
AAAGGCATGTCTTCTTCTTGGAGGTGCCACAATTTTAGTTTTTCTCACTCTTTATCAATTTGGATTTAATTATGTTGAAC
TATTCTCAAATGTTACATCTAAGTATGGTGATAAGTTTGTTCAGCCAGGTGGTTTAATAAAAAATCCCATTGATGCCATA
TCACTTGGCATAGCTCTGATGTTTGGTACAGCAGGGCTTCCCCATATTTTAATGAGATTTTATACAGTTCCTGATGCAAA
AGAAGCAAGAAAATCAGTATTTTATGCAACTGGGTTCATAGGTTACTTTTATATACTTACATTTACTATTGGGTTTGGAG
CAGCCGCATTGGTAGGACATGAGATAATTAGTAAAATTGACAAAGGTGGCAATATGGCAGCACCTTTACTTGCTGAAGCA
CTTGGAGGAGAAATATTTTTAGGATTCTTAGCGGCTGTTGCTTTTGCAACTATTTTAGCTGTAGTTGCCGGATTAACTCT
TGCAGGTGCATCAGCAGTGTCGCATGATATCTATGTAGGCGTGGTTAAGAGAGGAAGAGCAGATGAAAAACAGGAGGTAA
AAGCAGCTAAAATAGCTACTCTTTGCCTTGGATTGCTTGCAATAATACTTGGAATTGTATTTAAAGGACAGAATGTTGCT
TTCATGGTTGGTTTAGCCTTTGCAGTAGCTGCTTCTGCTAATTTTCCAGCTCTGTTTATGTCTATATTTTGGAAAAAATT
CACCACTCAGGGGGCTGTTTGGAGCATATATACAGGACTTTTGTTGAGTGTTATATTGATAATTTTAAGTCCAACAGTTT
GGGTTGATATATTGAAAAATACTCAACCCATATTTCCTTTGAAAAATCCAGGAATAGTTTCATTCTTTGGTTCATTTATA
GCTGGTATAGTAGTTTCTTGGCTTACAAAAGAAAAGGAAGCAGAAGAAAAATTTGAAACTGAAAAAATAAGGTCATATAT
AGGTATCGGTGCTGAATAA

Protein sequence :
MQTVLGQPTLTGIFFFLLFVAATLYITYWAAKRTRTTAEFYAAGRSITGLQNGLALAGDYMSAASFLGIAGLVSLKGYDG
LIYAVGWLVGWPIVMFLIAEPLRNLGKYTFADVVAYRLRQRPIRTAAATGALITVLFYLIAQMVGAGSLIKLMFGLPYEL
AIIIVGCLMIAYVLFGGMLATTWVQIIKACLLLGGATILVFLTLYQFGFNYVELFSNVTSKYGDKFVQPGGLIKNPIDAI
SLGIALMFGTAGLPHILMRFYTVPDAKEARKSVFYATGFIGYFYILTFTIGFGAAALVGHEIISKIDKGGNMAAPLLAEA
LGGEIFLGFLAAVAFATILAVVAGLTLAGASAVSHDIYVGVVKRGRADEKQEVKAAKIATLCLGLLAIILGIVFKGQNVA
FMVGLAFAVAASANFPALFMSIFWKKFTTQGAVWSIYTGLLLSVILIILSPTVWVDILKNTQPIFPLKNPGIVSFFGSFI
AGIVVSWLTKEKEAEEKFETEKIRSYIGIGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 1e-89 54
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 7e-72 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THEYE_A0030 YP_002247884.1 cation/acetate symporter ActP BAC0564 Protein 7e-108 62
THEYE_A0030 YP_002247884.1 cation/acetate symporter ActP BAC0570 Protein 2e-101 62