|
Name : THEYE_A1953 (THEYE_A1953) Accession : YP_002249743.1 Strain : Thermodesulfovibrio yellowstonii DSM 11347 Genome accession: NC_011296 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 1865722 - 1866690 bp Length : 969 bp Strand : - Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGGAAAACCTTATAGAGATAGCTCAGAAGGTTCTTACTATTGAAGCAGAATCTTTACAAACACTCAAAGAAAGAATCAA TGAAGATTTCCTTAAAGCTGTTGAAATAATCCATAATTCAAAAGGTAGGGTTGTTGTAACAGGCATTGGGAAATCAGGGC TCATTGGGAGAAAAATTGCTGCTACTTTAGCTTCAACAGGTACACCATCATTTTTTATGCATCCAGCAGAGGCAAGTCAC GGTGATCTTGGTATGGTTACAGAAGAAGATGTTGTTATAGCAATCTCTAACAGCGGTGAGACAGATGAACTAATAAGACT TATTCCATTTTTAAAGTATTTCAATGTTAAAATAGTTGCCATTACTGGAAATACTCAATCCACATTGGCTAAGCAGGCTG ATGCGGTTCTTGATGTTTCTGTAAAAGAAGAAGCCTGCCCTTTCGGTTTTATTCCAACAGCCTCTACCACAGCCACATTG GCAATGGGAGATGCATTAGCTGTTGCTTTAATTATGCGAAATGGCTTTAAAAAAGAAGATTTTGCTTTTTTTCATCCAGG TGGCTCACTTGGGAGAAGAATGCTTACAAAGGTTAAAGATTTAATGCATACAGGAGATGAACTTCCTGTGTGTTTTCCGC AGACTGTCATGCTTGATGCAGTTTTAGAAATTTCATCCAAAAGGCTTGGAGTTGTTGTTGTTGTTGACGAAAATAAAAGA ATTTTAGGGATTATCACTGATGGTGATGTAAGAAGGGGTGTGCAGAGATATGGAAAAGACCTTTTTGATTTAAAAGCTTG TCAAATTATGACTATAAATCCTAAAACCATAAATGAAGACGAACTTGCAGCAGTTGCGCTTTCAGTAATGCAAAAATATT CAATAACAAGCCTTGTTGTTCCTAATAGTGATGGAACACTTGAAGGCTTAATTCACATTCATGATATCCTCAAAAAGGGC ATTCTTTAA Protein sequence : MENLIEIAQKVLTIEAESLQTLKERINEDFLKAVEIIHNSKGRVVVTGIGKSGLIGRKIAATLASTGTPSFFMHPAEASH GDLGMVTEEDVVIAISNSGETDELIRLIPFLKYFNVKIVAITGNTQSTLAKQADAVLDVSVKEEACPFGFIPTASTTATL AMGDALAVALIMRNGFKKEDFAFFHPGGSLGRRMLTKVKDLMHTGDELPVCFPQTVMLDAVLEISSKRLGVVVVVDENKR ILGIITDGDVRRGVQRYGKDLFDLKACQIMTINPKTINEDELAAVALSVMQKYSITSLVVPNSDGTLEGLIHIHDILKKG IL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 9e-59 | 47 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-58 | 47 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-58 | 46 |
