|
Name : THEYE_A1928 (THEYE_A1928) Accession : YP_002249718.1 Strain : Thermodesulfovibrio yellowstonii DSM 11347 Genome accession: NC_011296 Putative virulence/resistance : Virulence Product : chaperone ClpB 1 Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1845167 - 1847797 bp Length : 2631 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGAGATTTGATAAACTTACTTATAAAACTCAGGAAGCCATAAGAGAGGCTCAGAAGATTGCTTCACAGTATGGTAACCA GCAGATAGATGTAGAACATCTAATTTATGCCCTGGTTGAAGATAGTGAAGGGCTTGTGACTCGGATTCTTAAGGAATGCG GAGCAGACTTAAACTCAATCAAAACAGATTTAAAGAAAGCTATAGATAAAATTCCAAAGGTCTATGGTGCTCAGCCACTT GAGCAGGTCTATATTACTCCAAGACTTAATCAGCTTTTTGAAAAAGCTGACAAGGAAGCAGAACATCTTAAAGATGAATA TATAAGTGTGGAGCATCTTCTTATAGCTCTTTTTGATGTAGGAGGTCCTGCGCTTGATGCAATAAAAAAGCAGGCAGTTA CCCGTCAAAAAGTGCTTGATGCAATGAGGGCAATAAGAGGAGTTCATCAGGTAACTGATCCAAATCCAGAAGAAAAGTAT CAGGCATTGGTTAGATATGGCAAAAATCTTACAGAACTTGCAAAAAAGGGTAAACTTGATCCTGTTATTGGAAGAGATGA AGAAATTAGAAGAGTTATTCAAGTTTTAAGCAGAAGAACAAAGAACAATCCTGTTTTGATTGGTGACCCTGGTGTTGGTA AAACAGCTATAGTGGAAGGTCTTGCACAGAGGATAGTAGCAGGCGATGTTCCTGAATCTTTGAGGAATAAAGAACTTATA GCTCTTGATATAGGCTCACTTCTTGCAGGTGCAAAGTATCGTGGAGAGTTTGAGGAGAGACTCAAAGCAGTGCTTAAAGA GATTACACAGTCTGAAGGAAGAATTATTACATTTATTGATGAACTTCACACACTTGTAGGTGCAGGTGCTGCTGAAGGTG CAGTGGATGCAGCAAATATGCTCAAGCCAGCTTTAGCAAGGGGAGAGCTTAGATGCATTGGAGCAACTACTGTTAATGAA TACAGAAAATACATTGAAAAAGACCCTGCACTTGAAAGAAGATTTCAGCCTATTTTAGTTAAAGAGCCTTCTGTTGAAGA CACAATTTCTATTTTAAGAGGACTTAAAGAGAGATATGAGGTTCATCATGGTGTAAAGATAAAGGATTCAGCATTAGTTG CTGCTGCTGTGCTTTCAGCAAGGTATATAACAGACAGATACTTGCCTGATAAAGCAATTGATTTAATTGATGAAGCTGCG GCAAAGCTCAGAATGGAGATTGATAGCATGCCAATTGAACTTGATGAGATAGAAAGAAAACTTAGACAACTTGAGATAGA GCGTCAGGCATTGAGCAAAGAACCAACTGAAGATGCAAAGGAAAAAATAAAAAAGATTTCTCAGGAGATAGAGCAACTAC TCACTAAAAAAGAGGAACTGAACACACAATGGCAGGCTGAAAAAGAGTTTATTTTAAAAATCAGAGAGATTAAGGCAGAG ATTGAACAGGCAAAAATAGCAAGTGAACAGGCAGAACGTCAGGGAGATTTAACAAGGGCAGCAGAATTGAGATATGGCAA ACTTATTGAACTTCAGAAAGCACTTGATGAGGCAAATGCCCGACTTAAAGAGATTCAGAGAGGAAGGCAAATGCTCAAAG AAGAGGTTGATGAAGAGGATATTGCTGAGGTAGTGGCTAAATGGACAGGAATTCCAGTTAAAAGACTTCTTGAAAGCGAA ACTCAGAAACTTATAAAAATGGAAGAGCGACTCAAAGAAAGAGTTGTTGGACAAGATGAAGCAATTATAGCAGTATCAAA TGCAATAAGGAGAGCAAGAGCAGGATTACAGGATCCTAATCGTCCTATTGGGTCATTCATGTTTCTTGGACCTACAGGTG TTGGTAAAACAGAACTTGCAAAGGCGCTGGCAGAATTTCTATTTGATGATGAAAATGCCATGATTCGTATTGATATGTCT GAATATCAAGAGCGTCATACTGTATCTCGTCTTATTGGTGCTCCTCCTGGTTATGTGGGCTATGAAGAAGGAGGTCAACT TACAGAGGCTGTAAGAAGGCGGCCATACAGTGTTGTTCTTTTTGATGAAATTGAAAAGGCTCATCAGGAAGTATTCAATA TACTCTTACAGATACTTGATGATGGTCGTCTTACAGATGGACACGGAAGAACTGTTGACTTCAGAAACACAATTATCATA ATGACATCAAACATAGGAAGCGCCCATATTCAAGAATTTCTTGAAAATAAAGGTTCTGAGCACTGGCAGGATTTAAAGAA AGATTTAAAAACAAGGATAATAGATGATTTAAGAGCATTTTTCAGACCTGAGTTTCTTAATAGGATTGATGAGATAATAA TCTTTAATCCATTGAGTAAAGAGATAATGAAGGATATCATAGAAATTCAGATTAAACGGATAAAACAGTATCTTAAACAG AGGAAGATTGATATAATCCTTACAGAAGAAGCAAAGGACTATATTGTAAGAATTGGATATGATCCTGTATATGGTGCAAG ACCTTTGAGAAGAGTGTTACAGAAAGAAATTCTTGATGCTCTGGCAATAAAACTAATTGAAGGAACATTTAAAGAAGGGG AGACTGTAGAAGTTGATTTTAAAGATGGTAAAATTGTATTTAATAAGGTTGTTTTGGTAGAAGCAGCCTAA Protein sequence : MRFDKLTYKTQEAIREAQKIASQYGNQQIDVEHLIYALVEDSEGLVTRILKECGADLNSIKTDLKKAIDKIPKVYGAQPL EQVYITPRLNQLFEKADKEAEHLKDEYISVEHLLIALFDVGGPALDAIKKQAVTRQKVLDAMRAIRGVHQVTDPNPEEKY QALVRYGKNLTELAKKGKLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGDPGVGKTAIVEGLAQRIVAGDVPESLRNKELI ALDIGSLLAGAKYRGEFEERLKAVLKEITQSEGRIITFIDELHTLVGAGAAEGAVDAANMLKPALARGELRCIGATTVNE YRKYIEKDPALERRFQPILVKEPSVEDTISILRGLKERYEVHHGVKIKDSALVAAAVLSARYITDRYLPDKAIDLIDEAA AKLRMEIDSMPIELDEIERKLRQLEIERQALSKEPTEDAKEKIKKISQEIEQLLTKKEELNTQWQAEKEFILKIREIKAE IEQAKIASEQAERQGDLTRAAELRYGKLIELQKALDEANARLKEIQRGRQMLKEEVDEEDIAEVVAKWTGIPVKRLLESE TQKLIKMEERLKERVVGQDEAIIAVSNAIRRARAGLQDPNRPIGSFMFLGPTGVGKTELAKALAEFLFDDENAMIRIDMS EYQERHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIEKAHQEVFNILLQILDDGRLTDGHGRTVDFRNTIII MTSNIGSAHIQEFLENKGSEHWQDLKKDLKTRIIDDLRAFFRPEFLNRIDEIIIFNPLSKEIMKDIIEIQIKRIKQYLKQ RKIDIILTEEAKDYIVRIGYDPVYGARPLRRVLQKEILDALAIKLIEGTFKEGETVEVDFKDGKIVFNKVVLVEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-100 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-99 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-99 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| THEYE_A1928 | YP_002249718.1 | chaperone ClpB 1 | VFG2076 | Protein | 2e-114 | 44 |
