Gene Information

Name : rdgB (THEYE_A1837)
Accession : YP_002249628.1
Strain : Thermodesulfovibrio yellowstonii DSM 11347
Genome accession: NC_011296
Putative virulence/resistance : Unknown
Product : RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 1763983 - 1764597 bp
Length : 615 bp
Strand : -
Note : identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042

DNA sequence :
ATGAAAATAGTTATTGCTTCAAGAAACAGAAAAAAAATAGAAGAGTTAAAAAGAATTTTGCAAGGACTTGAAATTACTAT
TCTTTCTGTTAATGATTTTCCTGAACTTGAAGAAGTTAAGGAAGATGGATTAACTTTTGATGAAAATGCTTTAAAAAAAG
CAAGATATGTTTGTCAACAAACTGGATTGCCTGCTCTTTCTGATGATTCAGGTTTGGAAGTTGAGGCATTAGGAGGCAGA
CCAGGTGTCAGATCAGCAAGATATGCAGGAGATGAGGCAAGTGATGATGATAACATCAAAAAACTTCTTGAAGAATTAGC
AGGAGTTCCTTCAGAAAAGAGAACTGCGCAATTTGTGTGTTGCATTGCGCTGGTTTTTCCGGACGGGAAAGAGTATATCT
TCTGGGGATATGTTAGAGGTAAAATCTCAGAGATTCCAAGAGGAACTCAGGGTTTTGGATATGATCCTGTATTTATACCC
GAAGGATTTAAAAAAACATTTGCTGAAATGTCCCCCCATGAAAAAGATAAGATAAGTCATCGTAAAGAAGCACTTGACAA
ATTAAGAGATTTTTTGATAAAATTTGCCCCAATTTATAAGCAAAACTTATTATAA

Protein sequence :
MKIVIASRNRKKIEELKRILQGLEITILSVNDFPELEEVKEDGLTFDENALKKARYVCQQTGLPALSDDSGLEVEALGGR
PGVRSARYAGDEASDDDNIKKLLEELAGVPSEKRTAQFVCCIALVFPDGKEYIFWGYVRGKISEIPRGTQGFGYDPVFIP
EGFKKTFAEMSPHEKDKISHRKEALDKLRDFLIKFAPIYKQNLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 3e-27 41