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Name : serS (THEYE_A0018) Accession : YP_002247872.1 Strain : Thermodesulfovibrio yellowstonii DSM 11347 Genome accession: NC_011296 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 18724 - 19998 bp Length : 1275 bp Strand : + Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGCTTGATATAAAATTTGTAAGAGCAAATCCTGAAAAACTAAAGGAAGCTTTAGACAAGAGAGGCTATCAGATAGACTT TGAAGAGTTTCTCTCTCTTGAAAGAGAAAGACTTTTGCTTTTAAGAGAGATTGAGCAAAAAAGAGCGATAAGAAACTCTG TTTCCCAAGAAATTGCCCACCTTAAAAAGTTAAAGAGTGACAATGAAACAATAGATAAACTTATAGCTGAAATGCGTAAA CTTGGAGAAGAATTAGGCTCTATTGAGCAAAAACTACGGGAAATAGAAGATAAGGTTCAAAACTTCTTGCTTTTTCTCCC AAATATCCCTCATGATTCTGTCCCTCTTGGTAAAGATGAAAATGAGAATGTAGAGATAAGACGTTGGGGTGAACCCTCTC ATTTTGATTTTGAGCCAATGAATCATTGGGATATAGGAGAGATTCTTGGAATAATAGATTTTGAGCGGGCAAGTAAAATT GCGGGAAGTAGATTTGCCATAATGAAAGGTATGGGAGCCCGACTTGAGAGAGCACTTATAAACTTTATGCTTGATCTGCA CACACAGAAGGGATATATTGAGGTATTACCGCCAATTTTGGTAAATAAGGTTTCTATGACAGGGACAGGACAATTGCCTA AATTTGAAGAGGACCTCTTTAAAATAGTAGACCCAGAATTTTATTTAATTCCTACTGCAGAAGTTCCCGTAACAAATATT CACAGAGAAGAGATTCTCTCTGAAGATGAGTTGCCAATTTATTATGTATCTTATACTCCTTGCTTTCGTAAAGAAGCTGG ATCACATGGCAAGGATGTAAGGGGACTCATTAGGCAGCATCAGTTTAATAAGGTTGAGCTTGTAAAATTTGTAAAACCTG AAGACTCCTATGAAGAACTTGAGTCTCTTACAAGGGATGCGGAAGAAGTTCTAAAGATGCTTGGGCTTCCCTATAGAGTA GTTGCTTTATGCACCGGAGATTTAGGATTTGCTTCAGCAAAAACCTATGATATTGAAGTATGGCTTCCAGGACAGGGTAG ATACAGAGAGATTTCTTCTTGTTCCAATTTTGAAGACTTTCAGGCAAGAAGAGCTAATATAAGATTTCGTAGAAGAGATA AAAAAGGAACAGAGTTTGTCCACACATTAAACGGTTCAGGACTTGCCATTGGTAGAACATTGGTGGCAATTCTTGAAAAC TATCAACAAAAAGACGGTTCTGTAATAGTGCCTGAAGTTTTAAGACCCTATATGGGTATAGATGTAATAAGATGA Protein sequence : MLDIKFVRANPEKLKEALDKRGYQIDFEEFLSLERERLLLLREIEQKRAIRNSVSQEIAHLKKLKSDNETIDKLIAEMRK LGEELGSIEQKLREIEDKVQNFLLFLPNIPHDSVPLGKDENENVEIRRWGEPSHFDFEPMNHWDIGEILGIIDFERASKI AGSRFAIMKGMGARLERALINFMLDLHTQKGYIEVLPPILVNKVSMTGTGQLPKFEEDLFKIVDPEFYLIPTAEVPVTNI HREEILSEDELPIYYVSYTPCFRKEAGSHGKDVRGLIRQHQFNKVELVKFVKPEDSYEELESLTRDAEEVLKMLGLPYRV VALCTGDLGFASAKTYDIEVWLPGQGRYREISSCSNFEDFQARRANIRFRRRDKKGTEFVHTLNGSGLAIGRTLVAILEN YQQKDGSVIVPEVLRPYMGIDVIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-109 | 56 |
