Gene Information

Name : THEYE_A0156 (THEYE_A0156)
Accession : YP_002248007.1
Strain : Thermodesulfovibrio yellowstonii DSM 11347
Genome accession: NC_011296
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 160395 - 161084 bp
Length : 690 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGAGTAAGAAAATTCTAATTGTAGAAGATGAAAAGGAAATTGCAGAGTTAATAGCTTATAGCCTGAAAAAAGAAAAATA
TGATATCTCAATAGCATTAGACGGAGAAACAGCATTAAAAAAATTGAGAGAAACTGTTTATGACCTTGTTATTCTTGACC
TGATGTTACCAGGAATTCAAGGGCTTGAGATATGTAAAATCATACGGAACAATTCAAATATGCAGAAGACAGGAATAATA
ATCGTGACTGCAAAGAGTGAAGAATTTGACAAAATCACAGGTCTTGAGACAGGAGCTGATGATTATATTACCAAGCCTTT
CAGCCCAAGAGAGTTAATAGCAAGAGTTAAAGCTGTTATGAGAAGAACATTGCCGGCTGTTTCTAATAATCAGATTATCA
AAATAAAAGATTTAATTATAGATAAGGAAAAATATTTAGTAACAGTAAAAGGACAACCCAAGAGACTTTCAGCAACTGAG
TTTAAGCTTCTTTTGTATCTTGCAGAACGACCTAACAAAATTTTTAGCAGAGACCATCTTCTTGATGCTGTTTGGGGGCA
GGATATTTATGTAGATCCAAGAACCGTGGATGTTCATATAAGAAGACTTCGTTTAAAAATTGAAGATTATCCAGATAATC
CAGAGTATATAAAAACACTTCGCGGAATTGGATATTACATAGAGGGTTAA

Protein sequence : 
MSKKILIVEDEKEIAELIAYSLKKEKYDISIALDGETALKKLRETVYDLVILDLMLPGIQGLEICKIIRNNSNMQKTGII
IVTAKSEEFDKITGLETGADDYITKPFSPRELIARVKAVMRRTLPAVSNNQIIKIKDLIIDKEKYLVTVKGQPKRLSATE
FKLLLYLAERPNKIFSRDHLLDAVWGQDIYVDPRTVDVHIRRLRLKIEDYPDNPEYIKTLRGIGYYIEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-31 43
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 9e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_012469.1.7685629. Protein 2e-46 50
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 1e-38 46
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 1e-38 46
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 1e-38 46
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 1e-38 46
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 1e-38 46
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 1e-38 46
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 1e-38 46
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 1e-38 46
THEYE_A0156 YP_002248007.1 DNA-binding response regulator AE015929.1.gene1106. Protein 2e-35 46
THEYE_A0156 YP_002248007.1 DNA-binding response regulator HE999704.1.gene2815. Protein 2e-38 46
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_012469.1.7686381. Protein 8e-43 45
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 9e-47 45
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 1e-46 45
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 1e-46 45
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 7e-47 45
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 1e-46 45
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 1e-46 45
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 1e-46 45
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 1e-46 45
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 1e-46 45
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 1e-46 45
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_005054.2598277.p0 Protein 1e-35 44
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_014475.1.orf0.gen Protein 1e-35 44
THEYE_A0156 YP_002248007.1 DNA-binding response regulator AE016830.1.gene1681. Protein 6e-41 44
THEYE_A0156 YP_002248007.1 DNA-binding response regulator AE000516.2.gene3505. Protein 2e-37 44
THEYE_A0156 YP_002248007.1 DNA-binding response regulator DQ212986.1.gene4.p01 Protein 1e-33 43
THEYE_A0156 YP_002248007.1 DNA-binding response regulator AM180355.1.gene1830. Protein 6e-34 42
THEYE_A0156 YP_002248007.1 DNA-binding response regulator CP004022.1.gene1676. Protein 9e-33 42
THEYE_A0156 YP_002248007.1 DNA-binding response regulator CP000034.1.gene2186. Protein 6e-36 42
THEYE_A0156 YP_002248007.1 DNA-binding response regulator NC_002695.1.916589.p Protein 5e-36 42
THEYE_A0156 YP_002248007.1 DNA-binding response regulator BAC0039 Protein 6e-36 42
THEYE_A0156 YP_002248007.1 DNA-binding response regulator AF130997.1.orf0.gene Protein 9e-34 41
THEYE_A0156 YP_002248007.1 DNA-binding response regulator AF155139.2.orf0.gene Protein 6e-34 41
THEYE_A0156 YP_002248007.1 DNA-binding response regulator CP001138.1.gene2239. Protein 3e-35 41
THEYE_A0156 YP_002248007.1 DNA-binding response regulator CP001918.1.gene3444. Protein 1e-34 41
THEYE_A0156 YP_002248007.1 DNA-binding response regulator BAC0596 Protein 3e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THEYE_A0156 YP_002248007.1 DNA-binding response regulator VFG1563 Protein 5e-32 43
THEYE_A0156 YP_002248007.1 DNA-binding response regulator VFG1702 Protein 8e-32 43