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Name : smpB (THEYE_A1193) Accession : YP_002249012.1 Strain : Thermodesulfovibrio yellowstonii DSM 11347 Genome accession: NC_011296 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1166186 - 1166635 bp Length : 450 bp Strand : - Note : identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086 DNA sequence : ATGTCCATAAAAATAGTCTGCCAGAATAAAAAAGCTTATGCTGATTACTTCATTGATGAAACAATTGAAGCAGGAATAGT TCTTACAGGAACAGAGGTAAAATCTCTAAGACAGGGCAAAGCAAATCTTAAAGACAGTTACGTCATAATTAAAGACAATG AGGCATGGCTCCTCAACTGTCACATAAGTCCTTACAGTCACGGAAATATTTTCAATCATGACCCTTTGAGAACAAGAAAA CTGCTTTTACATAAAAAAGAAATAGAAAGATTGAGAGGCAAAATTCAGCAGCAGGGCTATACACTGATTCCGCTTAAGAT ATATTTCAAAGGACCATATGTAAAAGTTGAAATAGCTCTTGCAAGGGGTAGAAAGAAATACGAAAAAAGAGATATAATTA AAAAGAAAGAAGCTCAAAGAGAAATTGAGCGTGCCCTAAAAAACAAATGA Protein sequence : MSIKIVCQNKKAYADYFIDETIEAGIVLTGTEVKSLRQGKANLKDSYVIIKDNEAWLLNCHISPYSHGNIFNHDPLRTRK LLLHKKEIERLRGKIQQQGYTLIPLKIYFKGPYVKVEIALARGRKKYEKRDIIKKKEAQREIERALKNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 6e-29 | 54 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 4e-26 | 50 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 2e-19 | 44 |
