Gene Information

Name : THEYE_A1156 (THEYE_A1156)
Accession : YP_002248980.1
Strain : Thermodesulfovibrio yellowstonii DSM 11347
Genome accession: NC_011296
Putative virulence/resistance : Virulence
Product : formate-dependent nitrite reductase 4Fe4S subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 1134428 - 1134985 bp
Length : 558 bp
Strand : -
Note : identified by match to protein family HMM PF00037

DNA sequence : 
ATGCCAAGGTATGTCATGGTAATAGACGTGGAAAAATGTATTGGATGCATGGCTTGTGTAATTGCCTGTAAAAAAGAAAA
CAATGTGCCTGAAGAGCATTTCAGAACCCGCGTTGTAGAAGAAGTAAGAGGAGAATTCCCGAGTCTTAGAATGGAATTAA
GAAGTGAACTCTGTAATCATTGTGAAGAAGCTCCATGCATAGATGCTTGTCCAACGAGAGCATCTCACAGGGCAAAGGAT
GGAACAGTTCAGATAGACAGAAAAAAATGTATAGGCTGTAAAGCCTGTATTTTAGCGTGTCCTTATGATGCAAGATATTC
TCATCCTAAGGGATATGCAGATAAATGCTCCTTCTGTGAACATAGACTTAAGGAAGGCAAAAAACCTGCCTGTGTTGAAA
CATGTCTTGGAAAGTCAAGAATATTTGGAGATCTTGAAGACTCAAACAGTGAAGTAGCGGAATTGTTAAGAAAATATGAT
TCATCTGTGAGACTTGAGTTTGCTGGAACGCGCCCCAGAGTTTTTTACATTAAAAAGAAATTTGCAGGAGGTCTATGA

Protein sequence : 
MPRYVMVIDVEKCIGCMACVIACKKENNVPEEHFRTRVVEEVRGEFPSLRMELRSELCNHCEEAPCIDACPTRASHRAKD
GTVQIDRKKCIGCKACILACPYDARYSHPKGYADKCSFCEHRLKEGKKPACVETCLGKSRIFGDLEDSNSEVAELLRKYD
SSVRLEFAGTRPRVFYIKKKFAGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 8e-37 43
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 8e-37 43
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 7e-37 43
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 7e-37 43
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 5e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
THEYE_A1156 YP_002248980.1 formate-dependent nitrite reductase 4Fe4S subunit VFG0486 Protein 2e-37 43