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Name : kdsB (THEYE_A0011) Accession : YP_002247865.1 Strain : Thermodesulfovibrio yellowstonii DSM 11347 Genome accession: NC_011296 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 10169 - 10936 bp Length : 768 bp Strand : - Note : identified by match to protein family HMM PF02348; match to protein family HMM TIGR00466 DNA sequence : ATGGTTACTATATGTGTAATCCCTGCAAGATATGGTTCAACAAGATTCCCTGGAAAACCTCTTGCTTTCTTAAAAAATAA ACCCATTATTCAGCATGTGTATGAGAGGGCTAAATCTTCTAAAATGATAGATGAAGTTTTTGTAGCTACTGATGACAGTA GAATTTTACACACTGTAGAATCCTTTGGCGGTAAAGCTATAATGACATCCTCTAAACATCCTTCAGGAACAGATAGAATT GCTGAAGCAGTTGATAAATTATTACAGGAAGGATATAATTTACAAGAAAGCTCAATTGTAATAAATCTTCAAGGAGACGA ACCTCTCATTAAAAAAGAGATGATTGATCAATTAATAGATTTAATGAAAAATGAAAATGACTCAATAGGTACGCTTGCAA AGCGTATTGAAAAAGAAGATGATTTTTTCAATCCTAACATTGTTAAGGTAGTATTTGATAAAAATGGATATGCTCTTTAT TTTTCACGTAGTCCTATTCCTTTTGACAGAGAAAAGTTCATAAAAGGTTTTTCTAAGAATAACTTTATGTATAAGCATAT TGGAATTTATGGTTATAATGTAAGAATTCTTAAAAATTTTGTAGGACTCCCTATGTCAAGGCTTGAAGAAATAGAATCTC TTGAACAATTAAGAGCACTTGAAAATGGAATAAAAATTAAAGTTGGTTTAACCGAATATGATTCCTTTGGAATAGATACC CCAGAAGATTTGGAGGTAGCAGAAAAATGCCTAAATACATATTCATAA Protein sequence : MVTICVIPARYGSTRFPGKPLAFLKNKPIIQHVYERAKSSKMIDEVFVATDDSRILHTVESFGGKAIMTSSKHPSGTDRI AEAVDKLLQEGYNLQESSIVINLQGDEPLIKKEMIDQLIDLMKNENDSIGTLAKRIEKEDDFFNPNIVKVVFDKNGYALY FSRSPIPFDREKFIKGFSKNNFMYKHIGIYGYNVRILKNFVGLPMSRLEEIESLEQLRALENGIKIKVGLTEYDSFGIDT PEDLEVAEKCLNTYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 6e-43 | 46 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 5e-43 | 46 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-43 | 46 |
