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Name : COPRO5265_0867 (COPRO5265_0867) Accession : YP_002247205.1 Strain : Coprothermobacter proteolyticus DSM 5265 Genome accession: NC_011295 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence ClpC/mecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 788282 - 790699 bp Length : 2418 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : TTGTTTATCAGATTTTCTGAAGAAGCAAGAAAAGCACTTAAGGATGCCCAGGAAGAAGCGCGGCGCCTTAACAGTAGTTT TGTTGGCAGAGAGCACCTAGTCCTAGCTATGCTCAATGAAGATACGAGGGCATATTCAATAATCGATTCTTTAGGTGCGG ATGCCGATAATATAAGGAGTTCTATTGAAGATATTCCAATGCCCATGGCTTCAAGTTTGCAGTATCCCGAACTATCTAGT GAAGCTAGAAGACTTTTGGATATTGCCAGTGAAGAAGCACGCAAGCTTGCTCACTCCTATGTAGGCACAGAACATTTGTT ACTGGCAATACTCAAGGAACCATCCAGAGTTAGCTCCATACTTAATGAGAACGGTGTTTTTTATGACGACGTAAGAAAAA AGGTCATAGAAATGGGCGAGCAAGAACCAGAGGAAAAGGGAAAAACAAAAACCCCTGTTCTGGACAAGTTCTCCAAGGAC CTTGTTTCTTTGGCTGAAAAAGGAAAGTTGGATCCTGTCATAGGTCGTGAAACCGAACTCAACAGGATCATTGAGATATT GAGCCGCAGAATTAAGAACAATCCCATATTGCTTGGAGAACCTGGCGTGGGTAAGACGGCCATAGTTGAAGGGTTAGCCG AAAGAATTGCCTCTGGTAAGGTGCCTTATTCGCTAAAGAAGAAGCGTGTTGTACAGCTTGACATTTCTTCCATAGTTGCT GGAACTAAGTACAGAGGCGAATTTGAAGAACGCATGAAGAAGATCCTTGATGAAGTGAAGCGCACCAATGGTCAAGTGAT TTTGTTTATTGACGAAATCCATACCGTCATTGGTGCTGGAGCTGCTGAAGGTGCCATCGATGCTGCATCCATATTGAAAC CATCTTTGGCTCGTGGTGAGATAAAGGTTATTGGTGCAACAACCTATGATGACTACAGAAAGTACATTGAAAGGGACCCC GCTTTTGAACGTAGATTCCAGCCAGTTCAAGTAGAAGAACCTTCCCTGGAAGAAACTAAGCAAATTCTTATTGGGTTACG TCCCATTTACGAAAAATTCCACAACGTAAAGATAGCAGATGACGCCATAGAAGCAGCTGCCATATTGACGAAAAAATATG TGAAGCAAAGATTCCTGCCTGATAAAGCCATAGATGCGTTGGACGAAACATGTGCCAAAGTAAGGCTTGCAAACGAGGTC TTGCCTAGCAATCTCAGGGCGTTGCTTGACGAAATTGAAAATGTTAGATTGCAGAAACAGTTGGCTATTGACTCTCAACA GTTTGAAGAAGCGGCTGCATTGCGAGATAAGGAAAAAGCTCTCAAAGAAGAGTACTCAAGGATGGAAGAGATTTGGCTCT ATGAACGTAGCATGGATGAGAATCAGCCCACGGTGTCTTTCGATGACGTTGCGTACACCATATCTTCTTGGACTGGCATA CCTGTGGCAAAACTGCGCTTGGATGATAAGAAGAAACTATTAGAGATCGAAGATTATCTGCACCGCAGAATTGTTGGACA GAACGAAGCGGTTACTGCTGTAGCTAAAGCTATTAGAAGAAGCAGAACGGGCTTGCAAGATGATCGAAGACCCATCGGTG TCTTCCTTTTCCTTGGCCCCACAGGAGTAGGAAAGACAGAACTTGCGCGTGCTTTAGCCGAGTTCATGTTTGGTGAAGAA GAGGCCCTGATACGCATTGACATGTCAGAGTACATGGAAAAGTTCAATGTGAGCCGTTTGGTCGGCGCTCCTCCAGGATA TGTGGGATACGAAGAAGGAGGACAGCTTACTGAAGCGGTTAGAAGGAAACCGCACAGTATTGTGCTTCTAGATGAGATTG AGAAAGCACATCCAGATGTCTTCGATATATTGCTTCAAATATTCGAAGATGGCCGGCTAACCGATGGTCAAGGTCGTGTA GTAGATTTTAGGAACACGATCATAATAATGACCTCGAACCTGGGTAGCAGAGATATAAGCGCAGGTACAACCATAGGATT CTTAAAAGATCAAGTCAAATTTGAAAACATGGAAAACCTTGTCATGGATGCCGTGAAGAAGTTTTTTAAGCCCGAGTTCT TAAACAGGATCGATGAAATAGTAGTATTCCATCACTTAACAAACGACGATCTAAGACAAATCGTGGGTATCATGATGGAC GAACTAAACAAACAGCTTCGTTCTCAAAACCTTACGGTTAAAATCTCTGACAGAATGTTAGATCAAATAATCACAGAAGG ATATGAACCAAGGTTCGGTGCTAGACCATTGAGAAGAGCTATTCAGAGGCTTGTAAAAGATCCTTTGGCCGAGTACATGC TCAAACACGAAAACATCAGTGGAACATTGTTTATGGATTTCGTAGATGGCGAAATTACAATCAACAAGGTACCAGACGAG GAAGTTAGTAGAGTTTGA Protein sequence : MFIRFSEEARKALKDAQEEARRLNSSFVGREHLVLAMLNEDTRAYSIIDSLGADADNIRSSIEDIPMPMASSLQYPELSS EARRLLDIASEEARKLAHSYVGTEHLLLAILKEPSRVSSILNENGVFYDDVRKKVIEMGEQEPEEKGKTKTPVLDKFSKD LVSLAEKGKLDPVIGRETELNRIIEILSRRIKNNPILLGEPGVGKTAIVEGLAERIASGKVPYSLKKKRVVQLDISSIVA GTKYRGEFEERMKKILDEVKRTNGQVILFIDEIHTVIGAGAAEGAIDAASILKPSLARGEIKVIGATTYDDYRKYIERDP AFERRFQPVQVEEPSLEETKQILIGLRPIYEKFHNVKIADDAIEAAAILTKKYVKQRFLPDKAIDALDETCAKVRLANEV LPSNLRALLDEIENVRLQKQLAIDSQQFEEAAALRDKEKALKEEYSRMEEIWLYERSMDENQPTVSFDDVAYTISSWTGI PVAKLRLDDKKKLLEIEDYLHRRIVGQNEAVTAVAKAIRRSRTGLQDDRRPIGVFLFLGPTGVGKTELARALAEFMFGEE EALIRIDMSEYMEKFNVSRLVGAPPGYVGYEEGGQLTEAVRRKPHSIVLLDEIEKAHPDVFDILLQIFEDGRLTDGQGRV VDFRNTIIIMTSNLGSRDISAGTTIGFLKDQVKFENMENLVMDAVKKFFKPEFLNRIDEIVVFHHLTNDDLRQIVGIMMD ELNKQLRSQNLTVKISDRMLDQIITEGYEPRFGARPLRRAIQRLVKDPLAEYMLKHENISGTLFMDFVDGEITINKVPDE EVSRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-178 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| COPRO5265_0867 | YP_002247205.1 | negative regulator of genetic competence ClpC/mecB | VFG0079 | Protein | 0.0 | 52 |
| COPRO5265_0867 | YP_002247205.1 | negative regulator of genetic competence ClpC/mecB | VFG0080 | Protein | 9e-139 | 50 |
