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Name : COPRO5265_0843 (COPRO5265_0843) Accession : YP_002247181.1 Strain : Coprothermobacter proteolyticus DSM 5265 Genome accession: NC_011295 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence ClpC/mecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 762533 - 765013 bp Length : 2481 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGTTTGATGATATATTCCAACAGTTTTTCGGAAACGAGTTTTCAGATTTGTTTCCAGAGTTTTTTGAAAGGAGAAAAAG AGATATAACAGATTATCTATCATCTTCTTCTTTGTCCATCTTGCAGAATGCAGCAAACCTAGCAGGGGCTGCTGGTTATG ATGAACTTACGCCTGAGCATTTGGCCTATGCTTTACTCCAATACGAGCCTTTGGCAAATGTACTTGTGGAACACGGCGTT AATGTCGAAAAGATAAAAGAAGAGCTAGAAGAAAGCCTAACCCCAAAGGGTGAGGCAGTTAGCGAGGTAACAGTTTCGCC GCAGCTTAAGTCGGTCCTAGAAAGAGCAGCAGATATGGCACGAAACACATTCCGTGGTGAGGCTACTCCGGAACAGCTCT TGTTTGCCATTCTAGAAGATGGAGGATATGCCGCAAGCATCTTAGAAAGAAACAACCTGAAGCTGAACAATTTAATGGAT ATTATCGAGGAGGAAAGTCGCACACGTCCTTCTGCAGGTGCTTCACCTTACCAAAGAGGAACACAGACAGCGACCACGGA ACTAGAAAAGTTCGGAAGAGATCTTACAGAGCTAGCTAGACAAGGGAAACTAGATCCTATAGTAGGTCGAGACTCCGAAA TACAAAGGGTTCTGGAAATTCTTTCCCGTCGTACTAAGAATAATCCCATTCTAATAGGTGATGCTGGTGTTGGTAAAACG GCCATTGTAGAAGGCATTGCCCAGAGAATTGCCTCTGGGGATGTACCTGATGCTTTAAAAGGTAAAAGAGTAATCCAATT GGATATCGGTTCTCTGGTGGCTGGTACTAAGTACCGTGGCGAATTCGAGGAAAGAATGCAGAAAATACTTGATGAGGTAA TCAAGCAAAAGGACAAAATCATACTGTTCATAGATGAAATTCACACCATAATTGGCGCTGGCGGTGCAGAAGGCGCAGTA GATGCGTCGAATATGCTAAAACCTGCTTTGGCTCGCGGCGACCTACATGTCATAGGTGCAACAACCATAGATGAATATAG AAAGTACATTGAAAAGGACCCAGCTTTTGAAAGACGTTTCCAACCCGTGTATGTACCAGAGCCATCGTTAGAAGATACCA TTGCCATACTAAAAGTTCTAAAAGACAAGCTTGAGGCGCACCATAAAGTAAAGATCACCGACAACGCGATAAAGGCTGCA GTTTATTTGTCTGATCGCTACATCTCAGACCGCCATCTACCTGACAAGGCTATTGATTTACTAGACGAAGCATGCGCAAA AGTACGGTTAAGAGCTTCAAGTGTTCCCAAAGAACTTAAAGAATTGGATCAAAAGATTGATGAATTGCAGAAGCAACTGA GGTCAGCTGTAGATGCTAATGAATTTGAAAAAGCTGCACAACTTCGAGACGAAATAGCCAAGCTCAAAGAGGAAAGAGAA GAGTTTGAAAAGAAGGTAAGGCACGCTTCCTCTAATGATCTTACAGTGACAGACCAAGAAGTAGCAGAGGTTGTGTCAGC GTGGACAGGAATTCCTGTAACCCAGCTAGAGGAAAGCGAAAAGGAAAAACTAGCTAAACTGGAAGAAATTCTTCATCGTA GGGTAGTGGGCCAAGATGAAGCCATTTCTGCTGTAGCTCAGGCAATTAGGCGCGCTAGGACGGGCTTGAAGGATCCAAAG AGACCCATTGGCAGTTTCATATTCTTGGGTCCGACGGGCGTTGGTAAGACAGAACTGGCCAAAGCTTTAGCTGAAGTACT TTTTGGCGATGAGTCGGCGCTAGTACGCTTTGACATGTCTGAATACATGGAGAAGCACACCGTAAGCAGACTCATAGGTT CTCCGCCTGGTTACGTGGGATATGAAGAGGGAGGGCAACTCACCGAAGCAGTTCGCAGGCGTCCTTACAGTGTCATCTTA TTCGACGAAATCGAGAAGGCTCACCCCGATATTCACAATTTGTTGCTGCAAGTGTTAGATGATGGACGGCTCACCGACGC GAAGGGCCGTATCGTAGACTTTAAGAACACCATCATCATTATGACTAGCAACTTAGGAAGTCACATTCTAATGAATGCTG CTCAAGAGGGTAGGCCTTTTGAGGAAGCTGAAAAAGAAGTTATGGATCTGCTCAAGAGTTACTTCAGACCAGAATTCCTA AACAGGGTAGATGACATCGTGTTCTTCAAGCCGCTTACTATGGATGAAATAAAGGAGATCGCTAAGTTGCAGCTCTCATA TGTGGCTCAGCGCCTTTCACAGCAACAGATATACGTGGAATTTACTGATGCCGCCATAGAAAACCTTGCTAAGGTAGGGT TTGATCCAGAACTTGGAGCTAGGCCTCTTCGGAGAGCAATACAGAAAGAAATTGAGAACAGAATAGCCGAAAAAATGGTT CTAGGAGAAGTTGCGCCAGGTGACCACATAAAGGTGGATTTCAAAGAGGGAAGTTTCACCGTTCAGAAAATTAGTAGCTA A Protein sequence : MFDDIFQQFFGNEFSDLFPEFFERRKRDITDYLSSSSLSILQNAANLAGAAGYDELTPEHLAYALLQYEPLANVLVEHGV NVEKIKEELEESLTPKGEAVSEVTVSPQLKSVLERAADMARNTFRGEATPEQLLFAILEDGGYAASILERNNLKLNNLMD IIEEESRTRPSAGASPYQRGTQTATTELEKFGRDLTELARQGKLDPIVGRDSEIQRVLEILSRRTKNNPILIGDAGVGKT AIVEGIAQRIASGDVPDALKGKRVIQLDIGSLVAGTKYRGEFEERMQKILDEVIKQKDKIILFIDEIHTIIGAGGAEGAV DASNMLKPALARGDLHVIGATTIDEYRKYIEKDPAFERRFQPVYVPEPSLEDTIAILKVLKDKLEAHHKVKITDNAIKAA VYLSDRYISDRHLPDKAIDLLDEACAKVRLRASSVPKELKELDQKIDELQKQLRSAVDANEFEKAAQLRDEIAKLKEERE EFEKKVRHASSNDLTVTDQEVAEVVSAWTGIPVTQLEESEKEKLAKLEEILHRRVVGQDEAISAVAQAIRRARTGLKDPK RPIGSFIFLGPTGVGKTELAKALAEVLFGDESALVRFDMSEYMEKHTVSRLIGSPPGYVGYEEGGQLTEAVRRRPYSVIL FDEIEKAHPDIHNLLLQVLDDGRLTDAKGRIVDFKNTIIIMTSNLGSHILMNAAQEGRPFEEAEKEVMDLLKSYFRPEFL NRVDDIVFFKPLTMDEIKEIAKLQLSYVAQRLSQQQIYVEFTDAAIENLAKVGFDPELGARPLRRAIQKEIENRIAEKMV LGEVAPGDHIKVDFKEGSFTVQKISS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-176 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| COPRO5265_0843 | YP_002247181.1 | negative regulator of genetic competence ClpC/mecB | VFG0079 | Protein | 0.0 | 53 |
| COPRO5265_0843 | YP_002247181.1 | negative regulator of genetic competence ClpC/mecB | VFG0080 | Protein | 9e-151 | 49 |
