Gene Information

Name : COPRO5265_0807 (COPRO5265_0807)
Accession : YP_002247149.1
Strain : Coprothermobacter proteolyticus DSM 5265
Genome accession: NC_011295
Putative virulence/resistance : Virulence
Product : helix-turn-helix
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 732408 - 732611 bp
Length : 204 bp
Strand : -
Note : identified by match to protein family HMM PF01381

DNA sequence :
ATGGCAAAGTTCATATGTAACCTTAAGAAATACAGACAATTAGCTGGGTTAACCCAAGAAGAATTAGCAAACATGGTGCA
TGTGCGCAGGGAAACCATAGTGCGTTTAGAAGCTGGTAAGTACAACCCTTCCCTAAAGCTTGCCATGGACATTGCAAAAG
CTGTAAACGCACCCCTAGAAGAGATATTCATCTTTGAAGAGTAA

Protein sequence :
MAKFICNLKKYRQLAGLTQEELANMVHVRRETIVRLEAGKYNPSLKLAMDIAKAVNAPLEEIFIFEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-07 47
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-07 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
COPRO5265_0807 YP_002247149.1 helix-turn-helix VFG2168 Protein 2e-07 47
COPRO5265_0807 YP_002247149.1 helix-turn-helix VFG2175 Protein 2e-07 47