|
Name : serS (COPRO5265_0687) Accession : YP_002247035.1 Strain : Coprothermobacter proteolyticus DSM 5265 Genome accession: NC_011295 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 626457 - 627713 bp Length : 1257 bp Strand : + Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : TTGTATACCCTACGATTTGTGCGTGAGAATGAGAATCTTATGAGAGAGGCATTAAGGAAAAGACAATACGATGAATCCAT TGTTGACCAGCTATTGGCTGTAGATGAACAGCGTAGAAAGGAAGTTACTTCTCTGCAGGAACTGAACACGAGAAGAAATG AATTAACGTCCGTGGTTTCCAAGAAAAAGAAAGATGGAACTGACGCGTCCCAGGAAATAGAGCTACTTAAAAAACTCAAG GAAGAAGTTTCAGTGAAAGAAACCATCGTGTCGGAGCTTGAATCGAAAATTCAAGAAATACTAAAACAGTTGCCGAACAT TCCACATGAGTCGGTACCTACTGGAAAAGACTCGTCCGAGAATGTGGAAGTGCGGCGATGGGGAGAGCCAAGGACCTTTG CGTTTGAACCTAAACCTCACTGGGAAATAGGGGAAAACATGAACATATTGGATTTTCAAAGAGCTGCGAAAATATCTGGT TCACGCTTCGTAGCGTATCAAGGATTGGGTGCGCTGTTGGAATTAACGCTCATAAACTTCATGGTGTGGACTCATGTAAA GGATCATGGTTACACATTTGTTATTCCCCCTTACCTGGTAAAAAGCGATACAGCCTTTGGTACAGGTCACTTGCCGAAGT TTAAGGATGAGATGTATTACTGTCCCGAGGACGATCTTTACCTTATACCAACAGCAGAACTTCCCATGGTGGCGTATCAC AGTGGAGAGGTTCTTGTTGAGGCAGAGTTACCTAAGCGGTATGTGGCTTATTCTGCTTGTTTCAGGAGAGAAGCAGGAGC GGCAGGAAGAGACACCAGGGGTCTGATTAGAAGGCATCAGTTTAATAAAGTGGAGCTAATAAAGATAACAAAACCTGAAG ACTCCTATAATGAATTGGAGTCCATGGTGAGTGATGCTGAGTCCATATTGCAACTTCTTGAGCTTCCTTACAGAGTTGTT TTACTGTGTACTGGTGATATGGGCTTTGCCGCTGCTAAGACTTATGACATTGAAGTGTGGATGCCTTCTTACGGCCGCTA TGTTGAAATCTCCTCATGTTCGAATACTGAAGGTTTTCAGGCTCGCAGAGCTAACGTGAGAATGCGTCGACCTGATGGTT CTAATGACTATCCACATATGCTCAACGGATCTGGGTTGGCTGTAGGTAGAACTTTAGCGGCGATTATGGAGAATTACCAA AGAGAAGATGGAACTTTCGACATTCCTCAAGCGCTGCGGGCTTTCATGTTCGCTTAA Protein sequence : MYTLRFVRENENLMREALRKRQYDESIVDQLLAVDEQRRKEVTSLQELNTRRNELTSVVSKKKKDGTDASQEIELLKKLK EEVSVKETIVSELESKIQEILKQLPNIPHESVPTGKDSSENVEVRRWGEPRTFAFEPKPHWEIGENMNILDFQRAAKISG SRFVAYQGLGALLELTLINFMVWTHVKDHGYTFVIPPYLVKSDTAFGTGHLPKFKDEMYYCPEDDLYLIPTAELPMVAYH SGEVLVEAELPKRYVAYSACFRREAGAAGRDTRGLIRRHQFNKVELIKITKPEDSYNELESMVSDAESILQLLELPYRVV LLCTGDMGFAAAKTYDIEVWMPSYGRYVEISSCSNTEGFQARRANVRMRRPDGSNDYPHMLNGSGLAVGRTLAAIMENYQ REDGTFDIPQALRAFMFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-101 | 51 |
