|
Name : COPRO5265_0333 (COPRO5265_0333) Accession : YP_002246700.1 Strain : Coprothermobacter proteolyticus DSM 5265 Genome accession: NC_011295 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 312174 - 312830 bp Length : 657 bp Strand : + Note : identified by match to protein family HMM PF00813 DNA sequence : ATGCAGACGGCAACACCACTAATTAGTATTAATCTAGGTTCTGGCGGACTATCTATGGTCCAGCTCATTGTTCTTCTTAC TGTATTCACATTGGCTCCATCTTTTATAATGTTTTTCACAAGTTTTCTAAGGATTTTGGTGGTTTTTGCTTTTATGCGTA GTGCTCTTGGTCTGCAGCAGTTCCCTCCTGCTCAGGTTTTCACAGCTCTTGCTCTAATACTTACGTTTTTGATTATGGGT CCAGTTTTCTCTCAGGTTTACCAGCAGGCATGGGTGCCTTACAGTCAAGGCCAAATGGATTTTCAGCAATTTTTGTCAGC TGCAGAGAAGCCTGTGGGTGATTGGATGTTAAAACAGGTCAAACCAGAAGAATTGAACACCATGGCATCAATTTCTGGAA CGGATCCTAAAAACCCTAACTTTACAACCTTGGCCAGTGCTTTCATGGTTAGTGAACTAAAGACGGCTTTTACCATGGGG CTTCTGCTTTATTTGCCTTTCATTGCGCTAGATGTTATCATAGCATCGGTTCTCATGTCATTAGGTATGTTCATGATTCC TCCTGCCATGATCAGCTTACCTTTGAAAATACTACTTTTCGTTGCAGCTAATGGGTGGGATACAGTGATAATGGGACTTG TGAGGAGTTTCAGATGA Protein sequence : MQTATPLISINLGSGGLSMVQLIVLLTVFTLAPSFIMFFTSFLRILVVFAFMRSALGLQQFPPAQVFTALALILTFLIMG PVFSQVYQQAWVPYSQGQMDFQQFLSAAEKPVGDWMLKQVKPEELNTMASISGTDPKNPNFTTLASAFMVSELKTAFTMG LLLYLPFIALDVIIASVLMSLGMFMIPPAMISLPLKILLFVAANGWDTVIMGLVRSFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 5e-25 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| COPRO5265_0333 | YP_002246700.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 4e-36 | 42 |
