|
Name : ulaA (COPRO5265_0028) Accession : YP_002246400.1 Strain : Coprothermobacter proteolyticus DSM 5265 Genome accession: NC_011295 Putative virulence/resistance : Virulence Product : PTS system ascorbate-specific transporter subunit IIC Function : - COG functional category : S : Function unknown COG ID : COG3037 EC number : - Position : 24140 - 25417 bp Length : 1278 bp Strand : + Note : membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr DNA sequence : ATGGCGGCGTTTATCAATTTTCTGGTGAACAACATTTTTAACCAGGTGCCCATTTTAATCGGCATTGTAGCCATGATCGG TCTTATTCTCCAAATAAAACCTGTAGAAGAGGTCATATCAGGTACTATAAAGGCCGTCGTTGGCATTTTGATCATGCTCG CAGGTACCGACCTCTTCACCGCTGGCTTGTCTTCTTTCCAGACCATTGTTTCTTCCGCTTTCGGCATAACAGCGCCTGTT GCGGCCAATACTTTAGACAACTTTACCGCGAATTTTGGCAGCATAGCAGTATCCATAATGGCTTTGGGCTTTCTCATACA TCTAATCCTAGTAAGGTTGTTTAACACGGGTTTTGTGTATTTGACCGGTCACTTGATGTGGTGGATTTCCTTAGTAATCA CAGCAAGTTTCTTAGAAGTGTTCCCAACGATGAATCAGGGTTGGCTCATTGTTGTTGGTGCCATATTGATTGCTCTTTAC TGGACTTTGCAGCCTCGCATAATTCATAAATACATGAAAAAGGTGACCAAATCTGATGACGTCGGATATGGCCACACCTC CTCCAGTGTTGCTTATTTGGCAGCATCATTAGGTGGATACATAGGCAAACCCGAAGAGAGTACTGAAAACATCAAAATAC CACAGCGTTTGTCTTTCATGAACGATATCACAGTTGGAACTGCATTCATAATCGGCATTATTCTACTAATAGCGGTGTTC TTTGCAGATAGAGCCGTTGTAGTTGAACTTGCAGGTAACCTAAACTTTGTGGTATGGGCAATCCTGCAGGGCTTACGGTT CGCAGCGGGAATAACCATTCTACTCTATGGCGTAAGGCTCTTCTTGGGTGAAATCGTTCCTGCATTCAGAGGTATTTCTC AAAAACTCATTCCAGGTGCAAGACCTGCTTTGGATGTTCCCGTAGTATTCCCCTATGCGCCTACAGCAGTACTCGTCGGA TTCATAAGTTCCACAATTGTGTTCCTCATTCTCATGGTTATCTTTGGTGTAACGGGCTACGCCACAATTGTGCCATCCAT GATCATGCTGTTTTTCCCAGGTGCAGGTGCTGCCATATTTGGCAACGCTACTGGTGGCTGGAAAGGAGCTGTACTTGGTG GTGCTGTTAACGGTTTGTTCTTGGCTTTCGGGCAAGCTATCACTTGGCCCATGCTTAGCAATACGGCTCCTGAACTTGCA GTACTGGCAGATCCCGACTGGTATATAATCACATGGATCATTGTTGGCATAAGCAGTCTGATAAAGTCACTGATGTAA Protein sequence : MAAFINFLVNNIFNQVPILIGIVAMIGLILQIKPVEEVISGTIKAVVGILIMLAGTDLFTAGLSSFQTIVSSAFGITAPV AANTLDNFTANFGSIAVSIMALGFLIHLILVRLFNTGFVYLTGHLMWWISLVITASFLEVFPTMNQGWLIVVGAILIALY WTLQPRIIHKYMKKVTKSDDVGYGHTSSSVAYLAASLGGYIGKPEESTENIKIPQRLSFMNDITVGTAFIIGIILLIAVF FADRAVVVELAGNLNFVVWAILQGLRFAAGITILLYGVRLFLGEIVPAFRGISQKLIPGARPALDVPVVFPYAPTAVLVG FISSTIVFLILMVIFGVTGYATIVPSMIMLFFPGAGAAIFGNATGGWKGAVLGGAVNGLFLAFGQAITWPMLSNTAPELA VLADPDWYIITWIIVGISSLIKSLM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 1e-62 | 41 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 9e-63 | 41 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 9e-63 | 41 |
