Gene Information

Name : phnL (COPRO5265_1212)
Accession : YP_002247518.1
Strain : Coprothermobacter proteolyticus DSM 5265
Genome accession: NC_011295
Putative virulence/resistance : Resistance
Product : lipoprotein ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1083642 - 1084331 bp
Length : 690 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGGCAGACGTAGAAATACAACTGAAGGGTGTACGAAAAGTCTATGGAAAAGGAGAAGCGGCTTTTGAGGCCCTCAAAGG
TATTGATCTTGAAGTGCAGAAAGGCGAGTACATTGCTATAACAGGGCGGTCTGGTTCGGGTAAATCTACACTCATGCATG
TCATTGGCTGTCTGGACTCACTTACTGATGGAAAGTACTATTTGGAGGGCCAAGACGTATCGAAGCTGTCTGACGACGAT
CTAGCAAGGATCAGGAACAGAAAGATAGGTTTTGTTTTTCAGGCTTTTAACCTTTTACCTCATTTGAATCTCTTGGAACA
GGTCATGGTTCCCATGTACTACGCTGGCATTACCGGCAACAAGGCAAAGAACAAAGCCATGGAAGCTTTGGACCGGGTAG
GTCTATCCAGTAAATGGCATCGGCATGCTACACAGATCTCAGGAGGAGAAATGCAGAGAGTCGCCATTGCTAGAGCAATT
GTCATGGATCCAGGACTCTTACTTGCTGATGAGCCAACAGGCAATTTGGATACAGCTACATCAGATCAAGTGATGGATAT
TTTTCAGGAGCTAAACAAGAGTGGCAGCACCGTAGTGTTAGTTACACACGAAATAGATGTAGCATCCAGAGCCAAGCGAA
TTGTCCATTTGAAGGATGGCTTAATCGAATATGAGGAGTCGAAAGCATGA

Protein sequence :
MADVEIQLKGVRKVYGKGEAAFEALKGIDLEVQKGEYIAITGRSGSGKSTLMHVIGCLDSLTDGKYYLEGQDVSKLSDDD
LARIRNRKIGFVFQAFNLLPHLNLLEQVMVPMYYAGITGNKAKNKAMEALDRVGLSSKWHRHATQISGGEMQRVAIARAI
VMDPGLLLADEPTGNLDTATSDQVMDIFQELNKSGSTVVLVTHEIDVASRAKRIVHLKDGLIEYEESKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phnL YP_002247518.1 lipoprotein ABC transporter ATPase NC_012469.1.7686878. Protein 7e-55 50
phnL YP_002247518.1 lipoprotein ABC transporter ATPase CP001581.1.gene798.p Protein 8e-41 44
phnL YP_002247518.1 lipoprotein ABC transporter ATPase NC_008702.1.4606598. Protein 1e-44 43