Gene Information

Name : ybbA (SEN0488)
Accession : YP_002242637.1
Strain : Salmonella enterica P125109
Genome accession: NC_011294
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 545938 - 546624 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGCCAGCGGAAAACAGTGTTGAAGTTCATCGTCTCAGGAAGTCCGTCGGTCAGGGTGAGCATGAGCTTTCCATCCTTAC
CGGAATTGAACTGGTTGTCAAACGCGGCGAAACCATTGCGCTGATTGGCGAATCAGGATCGGGAAAATCTACGCTGCTGG
CGATTCTCGCCGGACTGGATGACGGCAGTAGCGGAGAGGTCAGTCTGGTCGGGAAACCGCTTCACCAGATGGACGAAGAG
GCGCGGGCGCAGCTTCGCGCTCAGCATGTCGGTTTTGTTTTTCAATCCTTCATGCTTATTCCTACGCTTAACGCGCTGGA
AAACGTTGAACTACCGGCCCTGCTACGCGGTGAAAACAGCGGTCAGAGTAAGGCGGGGGCGAAAGCGCTGCTCGAACAAC
TGGGACTGGGAAAACGGCTTGACCACCTTCCGGCACAGCTTTCCGGCGGCGAACAGCAGCGCGTAGCGCTGGCGCGCGCG
TTTAACGGGCGTCCTGATGTGCTGTTTGCCGATGAGCCGACGGGCAACCTTGACCGTCAGACCGGAGATAAAATCGCCGA
CCTGCTATTTTCGCTTAACCGCGAGCACGGCACCACGCTGATTCTGGTGACGCACGACCCGGCGCTGGCGGCGCGCTGCG
ACCGGCGGCTGCGGTTGGTCAACGGTCAGTTACAGGAGGAGGCATGA

Protein sequence : 
MPAENSVEVHRLRKSVGQGEHELSILTGIELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGKPLHQMDEE
ARAQLRAQHVGFVFQSFMLIPTLNALENVELPALLRGENSGQSKAGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDPALAARCDRRLRLVNGQLQEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_002242637.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-32 48
ybbA YP_002242637.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-38 47
ybbA YP_002242637.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-34 43