Gene Information

Name : safB (SEN0282)
Accession : YP_002242436.1
Strain : Salmonella enterica P125109
Genome accession: NC_011294
Putative virulence/resistance : Virulence
Product : atypical fimbria chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 322364 - 323077 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence : 
ATGGCGGTAGCTTTGTTTGCCTCTAATTCTATGGTTTCAGTATATGCCGCCAGGCAGCAATTAAATTCAGCCACTAAATC
ATTCAGCGTGAAGCTGGGAGCTACACGTGTGATTTATCACGCTGGTACACCAGGCGCGACGCTCTCGGTGAGCAACCCGC
AGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGAAGACAAAAATTCGCCAGCCCCCTTTATGGTGATGCCGCCT
CTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTATCCGTACTGGTGGTGACATGCCAACGGATCGTGAGAC
TTTACAGTGGGTCTGTATAAAGGCGGTACCACCCGAAAATGAACCGTCGGATACACAGGCTAAGGGCGCGACCCTTGACC
TCAATTTGTCCATCAGCACCTGTGACAAGCTGATTTTCCGCCCGGATGCCGTGAAGGGGACGCCGGAAGATGTTGCAGGA
AATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTAGAGAACCCCACCCCGTTTTACATGAATTTAGCCTCTGTCAC
AGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATATCCCCCCCTTTGCTGACAAAACACTAAATATGCCAGGTGGCACTC
GTGGTGATGTCGAGTGGAAAATTATTACAGACTTAGGTGGTGAAAGTCATCCGTTCCACTACGTTTTTAAATAA

Protein sequence : 
MAVALFASNSMVSVYAARQQLNSATKSFSVKLGATRVIYHAGTPGATLSVSNPQNYPILVQSSVKAEDKNSPAPFMVMPP
LFRLEANQQSQLRIIRTGGDMPTDRETLQWVCIKAVPPENEPSDTQAKGATLDLNLSISTCDKLIFRPDAVKGTPEDVAG
NLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGGTRGDVEWKIITDLGGESHPFHYVFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 2e-99 89
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 1e-54 50
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 1e-54 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
safB YP_002242436.1 atypical fimbria chaperone VFG0858 Protein 1e-52 51
safB YP_002242436.1 atypical fimbria chaperone VFG0943 Protein 1e-53 51
safB YP_002242436.1 atypical fimbria chaperone VFG0850 Protein 2e-55 50
safB YP_002242436.1 atypical fimbria chaperone VFG0852 Protein 8e-54 48
safB YP_002242436.1 atypical fimbria chaperone VFG0420 Protein 9e-44 41