Gene Information

Name : sscA (SEN1646)
Accession : YP_002243746.1
Strain : Salmonella enterica P125109
Genome accession: NC_011294
Putative virulence/resistance : Virulence
Product : type III secretion system chaperone protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1729
EC number : -
Position : 1744241 - 1744714 bp
Length : 474 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAAGACCCGACCCTACAACAGGCACATGACACGATGCGGTTTTTCCGGCGTGGCGGCTCGCTGCGTATGTTGTT
GGATGACGATGTTACACAGCCGCTTAATACTCTGTATCGCTATGCCATGCAGCTTATGGAGGTAAAAGAGTTCGCCGGCG
CAGCGCGACTTTTTCAATTGTTGACGATATATGATGCCTGGTCATTTGACTACTGGTTTAGGTTAGGGGAATGCTGCCAG
GCTCAAAAACATTGGGGGGAAGCGATATACGCTTATGGACGCGCGGCACAAATTAAGATTGATGCGCCGCAGGCGCCATG
GGCCGCAGCGGAATGCTATCTCGCGTGTGATAACGTCTGTTATGCAATCAAAGCGTTAAAGGCCGTGGTGCGTATTTGCG
GCGAGGTCAGTGAACATCAAATTCTCCGACAGCGTGCAGAAAAGATGTTACAGCAACTTTCTGACAGGAGCTAA

Protein sequence :
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQ
AQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVCYAIKALKAVVRICGEVSEHQILRQRAEKMLQQLSDRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1420 YP_216407.1 secretion system chaperone protein SscA Virulence SPI-2 Protein 4e-69 99
sscA NP_456129.1 putative Type III secretion system chaperone protein Virulence SPI-2 Protein 2e-69 99
sscA NP_805070.1 type III secretion system chaperone protein Virulence SPI-2 Protein 2e-69 99
sscA NP_460364.1 secretion system chaperone Virulence SPI-2 Protein 7e-70 99
sscA AAC28880.1 putative secretion chaperone Virulence SPI-2 Protein 5e-70 99
sscA CAA12186.1 SscA Virulence SPI-2 Protein 5e-70 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sscA YP_002243746.1 type III secretion system chaperone protein VFG0500 Protein 2e-70 99