|
Name : ssaT (SEN1624) Accession : YP_002243724.1 Strain : Salmonella enterica P125109 Genome accession: NC_011294 Putative virulence/resistance : Virulence Product : type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 1728801 - 1729580 bp Length : 780 bp Strand : - Note : - DNA sequence : ATGGCACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTGAGCCTCTCTTTATTACTTCC CCTATTAAAAAGTGGCAGTTTAGGGTCCGCGATTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCCATATTACCAA TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGCTGGTTAGGGTTAGTCACCGGAGAGGTGATTATT GGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG CGCGACAATGGGTACGATATTCAATTCTACAATAGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTCTTGT GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATATCAATATTTACCACCAGGG CGTACTTTATTATTTGACCAGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGTATCAGCTT CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG TGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTGGTTCTACTGACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC TATTTGGTTGAAAGCGATAAATTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA Protein sequence : MAQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGSAILRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG RTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHH YLVESDKFYIYLKDWFPSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaT | YP_216429.1 | secretion system apparatus protein SsaT | Virulence | SPI-2 | Protein | 9e-100 | 99 |
| ssaT | CAA68201.1 | secretion system apparatus, SsaT | Virulence | SPI-2 | Protein | 1e-99 | 99 |
| ssaT | NP_460386.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 1e-99 | 99 |
| ssaT | NP_456107.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 1e-99 | 99 |
| ssaT | NP_805092.1 | type III secretion protein | Virulence | SPI-2 | Protein | 1e-99 | 99 |
| YPO0272 | YP_002345354.1 | type III secretion apparatus protein | Virulence | Not named | Protein | 1e-45 | 51 |
| escT | AFO66312.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-23 | 41 |
| escT | AFO66402.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ssaT | YP_002243724.1 | type III secretion protein | VFG0521 | Protein | 6e-100 | 99 |
