Gene Information

Name : KPK_4950 (KPK_4950)
Accession : YP_002240728.1
Strain : Klebsiella pneumoniae 342
Genome accession: NC_011283
Putative virulence/resistance : Virulence
Product : GTPase family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 4988424 - 4989299 bp
Length : 876 bp
Strand : -
Note : identified by match to protein family HMM PF01926

DNA sequence : 
ATGAATAAACCTGACGGCCTTCAGGCCTTTGAACAACCGCTCGCGTCGCTTCCGCGCATGCTTCGCCAGCTTATTCTTGA
ACGTATCCAGAACCTGACCCATTACGAGCCGGTGATTGGCATCATGGGCAAAAGTGGTGCTGGTAAATCCTCTCTCTGCA
ACGAACTTTTCCGGGGCGAGGTGTCCCCGGTGAGTGACGTGAACGCCTGTACTCGCGACGTACTGCGCTTCCGATTGCGC
AGCGGTCGTCACAGTCTGGTGATTGTCGATTTACCGGGGGTAGGTGAAAACGGACTACGGGATCATGAATACCGTGCTCT
GTACTGTCGTATGCTGCCGGAGCTGGACCTGGTGCTGTGGGTCATTAAGGCCGATGATCGGGCGCTAACCGTGGACGAGC
AGTTCTGGCACGGTGTGATGCAACCTTACAGGCAAAAGGTACTGTTTGTGATTAACCAGGCTGACAAAATCGAACCCTGT
CATGAATGGGATACTCTCACCAGCAAGCCTTCACCGCACCAACTGGGAAATCTTAAAGCGAAGCAGGCTGCAATTATGGC
AATGTTTAAACCGCATCATCCGGTCTGTGTGGTGTCCGCCAGCACTGGATGGGGCATTGAGGATATGGTGGCAAACATGA
TGTGTTGTCTGCCTGACCGCGCCGCCAGCCCGGTGGTGACACAACTGCAAGGGAGACTCTGCACAGAGCCGGTAAAGTCG
CAGGCCCGTGACAGTTTCGGTGACGCTGTGGGCCGTGTTTTCGATACGGCTGAGTCATCGTCATTCCTGCCTGCGCCATT
GAAAACGGTGATTCGTAGCGTGCGTGATGCGGTGGTGTCGGTCGCACGGGCCGTCTGGGACTGGATATTCTTCTGA

Protein sequence : 
MNKPDGLQAFEQPLASLPRMLRQLILERIQNLTHYEPVIGIMGKSGAGKSSLCNELFRGEVSPVSDVNACTRDVLRFRLR
SGRHSLVIVDLPGVGENGLRDHEYRALYCRMLPELDLVLWVIKADDRALTVDEQFWHGVMQPYRQKVLFVINQADKIEPC
HEWDTLTSKPSPHQLGNLKAKQAAIMAMFKPHHPVCVVSASTGWGIEDMVANMMCCLPDRAASPVVTQLQGRLCTEPVKS
QARDSFGDAVGRVFDTAESSSFLPAPLKTVIRSVRDAVVSVARAVWDWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL99256.1 unknown Not tested LEE Protein 2e-72 62
unnamed AAL08471.1 unknown Not tested SRL Protein 2e-73 61
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 7e-73 61
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 8e-74 61
Z1210 NP_286745.1 histone Not tested TAI Protein 6e-73 61
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 6e-73 61
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 7e-73 61
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 7e-73 61
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 7e-73 61
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-71 60
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 9e-73 59
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 2e-72 59
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 3e-72 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPK_4950 YP_002240728.1 GTPase family protein VFG1674 Protein 5e-74 61
KPK_4950 YP_002240728.1 GTPase family protein VFG1062 Protein 9e-74 61
KPK_4950 YP_002240728.1 GTPase family protein VFG0654 Protein 1e-72 59