Gene Information

Name : KPK_4888 (KPK_4888)
Accession : YP_002240673.1
Strain : Klebsiella pneumoniae 342
Genome accession: NC_011283
Putative virulence/resistance : Virulence
Product : SMR family multidrug resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 4931870 - 4932283 bp
Length : 414 bp
Strand : +
Note : identified by match to protein family HMM PF00893

DNA sequence : 
ATGTCTTCGAAAACAAAATGCTGGTTATGGATGTTGCTGGTTATCCTCTCCGAAACCTCGGCAACCTCGACGTTAAAAAT
GTTCGGTAGCAGCGAAGGCAGCACCAGGATGCTGCTGCTCGGCCTGCTGATTGCGCTCTACTGCACCTGCTATTACTCGC
TCTCAAGGGCGGTGAAAGATATCCCGGTCGGCCTGGCATACGCCACCTGGTCCGGCACCGGCATCCTGGTGGTCTCGACG
CTGGGAATGGCATTCTACGGCCAGCACCCGGATACCGCCGCCATCATCGGCATGGCGGTGATCGCCAGCGGCATCATTAT
CATGAACCTGTTCTCGAAAATGGGTTCCGAAGCGAGCGAAGAGGACGCGCCCGCCGCGCCAGTCGCCTCCATGGATAAGA
ACATCGCTAACTAA

Protein sequence : 
MSSKTKCWLWMLLVILSETSATSTLKMFGSSEGSTRMLLLGLLIALYCTCYYSLSRAVKDIPVGLAYATWSGTGILVVST
LGMAFYGQHPDTAAIIGMAVIASGIIIMNLFSKMGSEASEEDAPAAPVASMDKNIAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 6e-44 87
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 9e-16 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPK_4888 YP_002240673.1 SMR family multidrug resistance protein BAC0324 Protein 5e-13 44
KPK_4888 YP_002240673.1 SMR family multidrug resistance protein BAC0002 Protein 2e-11 44
KPK_4888 YP_002240673.1 SMR family multidrug resistance protein NC_010410.6003348.p0 Protein 2e-11 44
KPK_4888 YP_002240673.1 SMR family multidrug resistance protein BAC0377 Protein 2e-11 44
KPK_4888 YP_002240673.1 SMR family multidrug resistance protein BAC0150 Protein 5e-11 43
KPK_4888 YP_002240673.1 SMR family multidrug resistance protein BAC0322 Protein 3e-13 41
KPK_4888 YP_002240673.1 SMR family multidrug resistance protein NC_002695.1.913273.p Protein 7e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
KPK_4888 YP_002240673.1 SMR family multidrug resistance protein VFG1587 Protein 3e-44 87
KPK_4888 YP_002240673.1 SMR family multidrug resistance protein VFG1586 Protein 4e-16 46