Gene Information

Name : pulF (KPK_4578)
Accession : YP_002240369.1
Strain : Klebsiella pneumoniae 342
Genome accession: NC_011283
Putative virulence/resistance : Virulence
Product : pullulanase secretion protein PulF
Function : -
COG functional category : N : Cell motility
COG ID : COG1459
EC number : -
Position : 4614436 - 4615650 bp
Length : 1215 bp
Strand : +
Note : identified by similarity to GB:AAA25128.1; match to protein family HMM PF00482; match to protein family HMM TIGR02120

DNA sequence :
ATGGCCCTGTTTCGCTATCAGGCACTGGACCCGCAGGGCAAAACCCGCCGCGGCGTTCAGCAGGCCGACTCCGCCCGCCA
CGCCCGCCAGCTGCTGCGGGACAACGGCTGGCTGGCGCTGGAAGTGACCGCCGCCGACCCGGCGCGCCGGCTGTGGCGCG
GCGGATCCCTCACCCGGCGCACCAGCGCCGGTGATTTAGCCCTGCTCACCCGCCAGCTGGCCACCCTGGTTGCCGCCGGG
ATCCCGCTGGAAAAAGCGCTCGATGCCGTCGCCCAGCAGTGCGAAAAGGCGCCGCTAAGAACGTTAATGGCCGGGGTGCG
CAGCAAAGTACTCGAAGGCCATTCGCTGGCGGAGGCGATGCGCGGCTATCCCGCCTGCTTCGATGGACTGTTCTGCGCCA
TGGTGGCGGCTGGCGAAACCTCCGGCCATCTCGACGGCGTGCTGAACCGGCTGGCGGACTATACCGAGCAGCGCCAGCAG
CTTCGCGCCCGCCTGCAGCAGGCAATGATCTATCCCATCGTGCTAACGCTGGTCGCCATCAGCGTGATCGCCATTCTGCT
CTCCACTGTGGTCCCAAAAGTCGTTGAGCAGTTTGTTCATCTGAAACAGGCCCTGCCGTTCTCCACCCGGCTGCTGATGA
GCCTGAGCGATATCGTGCGCAGCGCGGGGCCCTGGCTGGTGCTGCTGTCGCTACTGGCGCTGCTGACGCTGCGTTATCTG
CTGCGCCAGCCCGGCCGGCGGCTCGCCTGGGACCGGATGCTGCTGCGCCTGCCGGTCATCGGCCGCGTGGCGCGCAGCGT
GAACAGCGCACGCTACGCCCGCACCTTAAGCATTCTCAATGCCAGCGCGGTGCCGCTGCTGCTGTCGATGCGCATCAGCG
CCGGCGTCCTCAGCAACGCCTGGGCGCGCAGCCAGCTGGCGGCGGCCAGCGAATCGGTACGCGAAGGCGTCAGTCTGCAT
CGGGCGCTGGAATCCACCGCCCTGTTCCCGCCGATGATGCGCTACATGATCGCCAGCGGCGAGCAGAGCGGCGAGTTGAC
CGCGATGCTGGAGCGCGCGGCGGAGAACCAGGACCGGGAGCTGAGCGCGCAGATCCAGATGGCCCTCAGTCTGTTTGAAC
CCCTGCTGGTGGTCACCATGGCCGGCATGGTGCTGTTTATCGTGCTGGCTATCCTGCAGCCGATCCTGCAACTGAACACC
CTTATGAGTATGTAA

Protein sequence :
MALFRYQALDPQGKTRRGVQQADSARHARQLLRDNGWLALEVTAADPARRLWRGGSLTRRTSAGDLALLTRQLATLVAAG
IPLEKALDAVAQQCEKAPLRTLMAGVRSKVLEGHSLAEAMRGYPACFDGLFCAMVAAGETSGHLDGVLNRLADYTEQRQQ
LRARLQQAMIYPIVLTLVAISVIAILLSTVVPKVVEQFVHLKQALPFSTRLLMSLSDIVRSAGPWLVLLSLLALLTLRYL
LRQPGRRLAWDRMLLRLPVIGRVARSVNSARYARTLSILNASAVPLLLSMRISAGVLSNAWARSQLAAASESVREGVSLH
RALESTALFPPMMRYMIASGEQSGELTAMLERAAENQDRELSAQIQMALSLFEPLLVVTMAGMVLFIVLAILQPILQLNT
LMSM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspF CAE85232.1 GspF, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-93 56
gspF YP_854405.1 type II secretion protein GspF Not tested PAI I APEC-O1 Protein 3e-94 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pulF YP_002240369.1 pullulanase secretion protein PulF VFG2049 Protein 7e-89 56
pulF YP_002240369.1 pullulanase secretion protein PulF VFG0181 Protein 7e-78 49
pulF YP_002240369.1 pullulanase secretion protein PulF VFG1870 Protein 4e-77 44