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Name : ldcC (KPK_4534) Accession : YP_002240326.1 Strain : Klebsiella pneumoniae 342 Genome accession: NC_011283 Putative virulence/resistance : Virulence Product : lysine decarboxylase, constitutive Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : - Position : 4558523 - 4560676 bp Length : 2154 bp Strand : - Note : identified by similarity to SP:P52095; match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711 DNA sequence : GTGAATATTATCGCCATCATGGGGCCTCACGGCGTCTACCACAAAGACGAGCCGATCAAAGAACTGGAAGCGGCGCTGCA GCGCCAGGGCTTCCAGACCATCTGGCCGCAAAACAGCGCCGACCTGCTGCAGTTTATTGAGCACAACCCGCGCATCTGCG GGGTGATCTTCGACTGGGATGAATACAGCGTCGATCTGTGCAGCGATATCAATCAGCTCAATGAATATCTGCCCCTGTAC GCCTTTATTAATGCCCACTCGACGATGGACGTCAGCAGTCAGGATCTGCGTATGACGCTGTGGTTCTTCGAATATGCGCT GGGACTCTCCGAAGAGATCGCCACCCGCATTGGGCAGTATACCCGCGAGTACCTGGACAATATCACCCCGCCGTTTACCC GCGCGCTGTTTAACTATGTGCAGGAGGGGAAGTATACCTTTTGTACACCGGGCCATATGGGCGGTAGCGCCTATCAGAAA AGCCCGGTGGGCTGCCTGTTCTATGATTTCTTTGGCGGAAATACGCTGAAGGCGGATGTCTCGATTTCGGTCACCGAGCT GGGCTCCCTGCTGGATCATACCGGCCCGCATCTGGAGGCGGAGGAGTATATTGCCCGCGCCTTTGGCGCTGAACAGAGCT ACATGGTGACCAATGGCACCTCGACGTCCAACAAAATTGTCGGTATGTACTCGGCGCCCGCCGGCAGCACGCTGCTGATT GACCGTAACTGTCACAAATCACTGGCCCACCTGCTGATGATGAGCGATGTGGTTCCCTTGTGGCTGAAGCCGACCCGCAA CGCGTTGGGGATCCTCGGCGGTATCCCCCGGCGCGAATTTACCCGCGACAGCATTCAGCAGAAAGTACGCGACACGGGCG GGGCGCAGTGGCCCGTGCATGCGGTGATCACCAACTCCACCTACGATGGCCTGCTCTATAACACCACCTGGCTTAAGGAG ACGCTCGACGTCCCGTCGATCCATTTCGATTCCGCCTGGGTGCCCTATACCCATTTCCATCCGATATATCAGGGGAAAAG CGGCATGAGCGGGGAGCGGATCCCCGGAAAAGTCATCTTCGAGACGCAGTCGACGCATAAGATGCTGGCCGCGCTGTCGC AGGCCTCGCTGATCCACATTAAGGGCAACTATGATGAAGAGACCTTTAATGAAGCCTTTATGATGCATACCTCGACGTCG CCGAGCTATCCCATCGTCGCGTCGATTGAGACCGCGGCGGCGATGCTGCGCGGTAACTCCGGTAAGCGCCTGATCCAGCG CTCCATTGAGCGAGCGCTGGATTTCCGCAAAGAGGTGCAGCGACTGCGCGAGGAGTCAGACGGCTGGTTCTTTGATATCT GGCAGCCGGAAGCGGTGGATAAAGCCGAGTGCTGGCCGGTGGCGCCTGGCGAAGACTGGCACGGTTTCAAAGATGCCGAT GCGGATCATATGTATCTCGATCCGGTGAAGGTCACCATTCTGACGCCGGGCATGGACGAGCAGGGGAATATGGATGAAGA GGGGATCCCGGCGGCGCTGGTGGCGAAGTTCCTCGACGAGCGGGGCGTGGTGGTGGAAAAAACGGGCCCCTATAACCTGC TGTTCCTGTTCAGCATCGGTATTGATAAAACCCGGGCGATGGGGCTGCTGCGCGGTCTGACCGAGTTCAAACGCGCCTAC GATCTTAATCTGCGGGTGAAAAATATGTTGCCGGATCTGTACGCGGAAGATCCCGACTTCTACCGCAACATGCGGATCCA GGATCTGGCACAGGGGATCCACCGCTTGATCCGTCAGCACCAGCTGCCGCAGCTGATGCTCAGCGCCTTTGACGTCCTGC CGGAAATGAAAATGACGCCGCATCACGCCTGGCAGCGCCAGATTAAGGGTGAGGTGGAAACCATTGAACTGGAGAACCTG GTCGGCCGGATTTCGGCCAACATGATCCTCCCTTATCCGCCGGGCGTACCGCTGCTGATGCCGGGAGAGATGATCACGGA GGAGAGCCGGGCAGTGCTCGATTTCCTGCTGATGCTCTGCTCCATCGGCCGTCATTACCCGGGGTTTGAGACCGATATTC ACGGGGCGAAGCGCGATGAGGACGGCGTGTATCGGGTACGAGTCTTAAAAAATGACGAAAGGCTTGCGCGTTAA Protein sequence : MNIIAIMGPHGVYHKDEPIKELEAALQRQGFQTIWPQNSADLLQFIEHNPRICGVIFDWDEYSVDLCSDINQLNEYLPLY AFINAHSTMDVSSQDLRMTLWFFEYALGLSEEIATRIGQYTREYLDNITPPFTRALFNYVQEGKYTFCTPGHMGGSAYQK SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARAFGAEQSYMVTNGTSTSNKIVGMYSAPAGSTLLI DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPRREFTRDSIQQKVRDTGGAQWPVHAVITNSTYDGLLYNTTWLKE TLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERIPGKVIFETQSTHKMLAALSQASLIHIKGNYDEETFNEAFMMHTSTS PSYPIVASIETAAAMLRGNSGKRLIQRSIERALDFRKEVQRLREESDGWFFDIWQPEAVDKAECWPVAPGEDWHGFKDAD ADHMYLDPVKVTILTPGMDEQGNMDEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTRAMGLLRGLTEFKRAY DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHRLIRQHQLPQLMLSAFDVLPEMKMTPHHAWQRQIKGEVETIELENL VGRISANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIGRHYPGFETDIHGAKRDEDGVYRVRVLKNDERLAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 70 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ldcC | YP_002240326.1 | lysine decarboxylase, constitutive | VFG1670 | Protein | 0.0 | 63 |
