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Name : clpV (KPK_3063) Accession : YP_002238889.1 Strain : Klebsiella pneumoniae 342 Genome accession: NC_011283 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3116187 - 3118841 bp Length : 2655 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03345 DNA sequence : ATGGAAAATCCAGCCAGCCTGTTACGCCGTCTTAATCCCTGCTGCGCCCGCGCAATGGAGGGGGCGGCCTCCCTGTGCCA GACCCGGGCGCATGCCGAGATCCTGCCCGAGCACTGGCTGCTTAAACTGCTGGAACAGGGGGAAGGCGATCTGACGGTGC TGGCGCGGCGCTATGAATGGGATATGGATGCGCTGTGGCAGGATCTGCTGAGCTGGCTGGATAAACAGCCGCGCTCGGTA CGTCATCGTCCCCAGCTCTCTGACCATACCCTGAGGCTGATGCAGGAGGCCTGGCTGATTGCCTCGCTCAGCGGCGAAGC GCAGATCCGCAGTGTTCACCTGCTGATGGCGCTGGTTGAAAAACAGAATCTGATCCAGTGCGATGGCCTGTGGCCGCTGT TAACGCTGGGCCAGCGTCAGCTGGAACGCCTGCGCCCCTTGCTGGATGCCCAGTCCGACGAACGTCCGCCAGCGCAGCAG GAAGCGGCGCTGGCGCAGCCCCATGGCGGGGACGTGGAATTTGTGGGGCGTCCTGCGGGCAGCGAACTGAATGCGGATGG GCTCAACCCGGCGCTGCAGAACGCGCTGGACAAATTCACTCTCGACGTCACCGCCAAAGCCAGAGACGGCCAGATTGACC CGGTGTTCGGACGCGACACGGAAATCCGCCAGATGGTGGATATTCTCTCCCGTCGGCGTAAAAACAACCCGATCCTCGTC GGTGAGCCGGGCGTGGGGAAGACCGCCCTGGTGGAAGGCCTGGCGCTGCGCATAGCCGAAGGCAACGTCCCCGACGCGCT GAAGCCGGTGTCGGTGCGCACCCTTGACCTCGGTCTGCTGCAGGCCGGCGCCGGGGTCAAAGGCGAGTTTGAGCAGCGGC TGAAAAATATCATTGAGGCGGTGCAGCAGTCGCCTTCGCCAGTGCTGCTGTTTATCGACGAGGCGCACACGATCATCGGC GCGGGTAATCAGGCGGGCGGCGCGGATGCCGCCAACCTGCTGAAGCCGGCGCTGGCCCGGGGCGAACTGCGGACCATCGC CGCCACCACCTGGAGTGAATACAAGCAGTACTTCGAGCGCGACGCCGCGCTGGAGCGCCGCTTTCAGATGGTCAAGGTGG ATGAGCCGGACGACGAGACCGCCTGCCTGATGCTGCGTGGCCTGAAGTCCCGCTATGCCGACCACCACGGCGTGCATATC ACGGATGATGCGGTGCGCGCCGCCGTGACGCTGTCACGACGTTATCTCACCGGTCGCCAGCTGCCGGACAAGGCAGTGGA TTTACTCGACACCGCTTCCGCCCGCCTGCGCATGAGTCTCGATACCGTGCCTGAGCCGCTGACCCGCATGAAGGCACAGC TCACCGCGCTGGCGATGGAGAAGCAGGCGCTGCTGGAAGATATTGCGCTGGGCAACAGCGCCCACGGCGAACGGCTGGCG GCCATTGAGCAGGAGGAGACCCGCCTTATTCTGGCGCTGGATACCCTCGAAACTCAGTATGGTCAGGAGCTGCAGCTGAC GGAGGCGCTGCTCGCCTGTCGCCGCGATATCTCCCGCCAGGCGGAAATTAGCGATCTACAAAACGCACTTATTGCCGTCC AGCTGGGCAATCCGCTGCTCGGGCTGGACGTCGACGTCCGCACCGTGGCGACGGTGATTGCCGACTGGACCGGCGTGCCA CTCTCCTCGCTAATGAAAGATGAGCAGACGGAGCTGCTGAGTCTGGAAGAGAGTCTCGGCAAACGGGTGGTTGGCCAGGA GGCGGCCCTGAGCGCTATTGCCCGGCGCCTGCGCGCCGCGAAAACCGGCTTGACGCCGGAGAACGGTCCGCAGGGGGTGT TCCTGCTGGTCGGGCCGAGCGGCACCGGCAAAACGGAAACGGCGCTCGCCCTGGCCGATGCGCTGTTCGGCGGCGAGAAA GCGCTGATCACCATCAATCTCTCCGAGTACCAGGAGCCGCACACCGTCAGCCAGCTGAAGGGTTCCCCGCCGGGCTACGT CGGCTACGGCCAGGGCGGGATCCTGACCGAGGCGGTGCGCAAACGCCCCTACAGCGTGGTGCTGCTCGATGAGGTGGAAA AGGCCCATCGCGATGTGATGAACCTGTTCTACCAGGTCTTCGACCGGGGGGTAATGCGCGACGGCGAGGGGCGTGAAATC GACTTTCGCAACACCGTGATCCTGATGACCGCAAACCTCGGTAGCGACCTCCTGATGCAGCTGCTGGATGAACAGCCGCA GGCCAGCGAATCAGACCTGCACGAGCTGCTGCGCCCGGTGCTGCGCGGCCACTTCCAGCCGGCGCTGCTGGCCCGCTTCC AGACGGTGATTTACCGTCCGCTGCCGGCGGGAGCGCTGCGCGCCATTGTCGGCATGAAGCTCGGGCAGGTAAGTCAGCGT CTGGCTTGCCATTACGGAATCACCACCACCCTCAGCGAGAGCCTGTTCGACGCGCTGACCGAGGCCTGCCTGCTGCCGGA TACCGGCGCCCGTAACGTCGACAGTCTGCTCAATCAGCAGATCCTGCCGGCACTGAGTCAGCAGCTATTGAGCCATATGG CGGCGGGGCAGAAACCGCGCCAGGTGACGCTGGGGTATCACGAAGAGGAAGGCGTCATGATGGCGTTTGACGAGGGGACA ATATCCGATGAGTAG Protein sequence : MENPASLLRRLNPCCARAMEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLSWLDKQPRSV RHRPQLSDHTLRLMQEAWLIASLSGEAQIRSVHLLMALVEKQNLIQCDGLWPLLTLGQRQLERLRPLLDAQSDERPPAQQ EAALAQPHGGDVEFVGRPAGSELNADGLNPALQNALDKFTLDVTAKARDGQIDPVFGRDTEIRQMVDILSRRRKNNPILV GEPGVGKTALVEGLALRIAEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEAVQQSPSPVLLFIDEAHTIIG AGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDETACLMLRGLKSRYADHHGVHI TDDAVRAAVTLSRRYLTGRQLPDKAVDLLDTASARLRMSLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSAHGERLA AIEQEETRLILALDTLETQYGQELQLTEALLACRRDISRQAEISDLQNALIAVQLGNPLLGLDVDVRTVATVIADWTGVP LSSLMKDEQTELLSLEESLGKRVVGQEAALSAIARRLRAAKTGLTPENGPQGVFLLVGPSGTGKTETALALADALFGGEK ALITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGVMRDGEGREI DFRNTVILMTANLGSDLLMQLLDEQPQASESDLHELLRPVLRGHFQPALLARFQTVIYRPLPAGALRAIVGMKLGQVSQR LACHYGITTTLSESLFDALTEACLLPDTGARNVDSLLNQQILPALSQQLLSHMAAGQKPRQVTLGYHEEEGVMMAFDEGT ISDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-139 | 44 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-102 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV | YP_002238889.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 1e-156 | 45 |
| clpV | YP_002238889.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 2e-132 | 44 |
