Gene Information

Name : clpB (KPK_1206)
Accession : YP_002237070.1
Strain : Klebsiella pneumoniae 342
Genome accession: NC_011283
Putative virulence/resistance : Unknown
Product : protein disaggregation chaperone
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1219997 - 1222570 bp
Length : 2574 bp
Strand : +
Note : identified by similarity to SP:P63284; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346

DNA sequence :
ATGCGTCTGGATCGTCTTACCAATAAATTCCAGCTTGCTCTTGCCGATGCCCAGTCACTCGCACTCGGGCACGACAACCA
ATTCATCGAACCTCTTCATTTAATGAGCGCCTTACTGAATCAGGAAGGGGGATCGGTACGTCCTTTATTAACCTCGGCGG
GCGTCAATGCCGGGAAACTACGCACTGACATCGAGCAGGCCTTGAGCCGTTTACCGCAGGTGGAAGGCACCGGCGGCGAT
GTACAACCTTCTCAGGATTTAGTGCGGATCCTGAACCTTTGCGACAAGCTGGCGCAAAAGAAAAAGGACAACTTTATTTC
GTCGGAACTGTTCGTTCTGGCGGCGCTTGAATCGCGCGGTACGCTGACCGACCTTTTAAAATCCGCCGGAGCAACAACCG
CCAACGTGACTCAGGCGATTGAACAAATGCGCGGAGGTGAAAGCGTGAACGATCAGGGTGCCGAAGACCAACGTCAGGCA
TTGAAGAAATTTACCGTCGATCTGACCGAGCGAGCCGAGCAGGGCAAGCTGGATCCGGTGATCGGCCGTGATGAAGAGAT
TCGCCGTACCATCCAGGTACTGCAGCGTCGTACCAAAAACAACCCGGTACTGATTGGTGAACCCGGGGTGGGTAAAACGG
CAATCGTCGAAGGACTGGCGCAGCGTATCGTCAACGGCGAAGTACCAGAAGGGTTGAAAGGCCGTCGGGTATTGGCGCTG
GATATGGGGGCGCTGGTGGCCGGGGCGAAATACCGCGGTGAGTTTGAAGAGCGTCTGAAAGGCGTGCTGACTGACCTGTC
AAAACAGGAAGGCAACGTCATTCTGTTTATCGACGAACTGCATACCATGGTGGGCGCTGGTAAAGCCGACGGTGCGATGG
ATGCGGGTAACATGCTGAAGCCGGCGCTGGCGCGTGGTGAACTGCACTGCGTCGGGGCGACGACGCTTGATGAATACCGT
CAGTACATCGAAAAAGACGCCGCGCTGGAACGTCGCTTCCAGAAAGTGTTCGTCGCCGAGCCGACGGTAGAAGATACCAT
CGCTATTCTGCGTGGCCTGAAAGAACGTTACGAGCTGCACCACCACGTGCAGATCACTGACCCGGCGATTGTCGCGGCGG
CGACCTTGTCGCATCGCTATATTGCCGACCGTCAGCTGCCGGATAAAGCCATCGACCTTATCGATGAGGCGGCGTCCAGC
ATTCGTATGCAGATCGACTCCAAGCCGGAAGAGCTGGACCGTCTCGATAGACGTATTATCCAACTGAAACTGGAACAGCA
GGCGCTGAAGAAAGAGTCTGATGAAGCGAGCCTGAAACGTCTCGATATGCTCAACGAGGAGCTGGCGGATAAAGAGCGTC
AGTACTCGGTACTGGAAGAAGAGTGGAAAGCGGAAAAAGCCTCTCTCTCCGGCACCCAGACTATTAAAGCCGAGCTGGAA
CAGGCGAAAATCGCTATCGAACAGGCGCGTCGCGTCGGCGATCTGGCGCGGATGTCCGAGCTGCAGTACGGCAAAATTCC
GGAACTGGAGAAACAGCTGGCGGCTGCCACTCAGTCCGAAGGGAAAACCATGCGTCTGCTGCGTAATAAAGTGACGGATG
CTGAGATCGCCGAAGTGCTGGCCCGCTGGACCGGTATCCCGGTCTCCCGGATGATGGAAAGCGAGCGCGACAAACTGCTG
CGTATGGAGCAGGAGCTGCATCATCGGGTGATTGGCCAGGATGAGGCGGTTGAAGCGGTATCGAACGCCATTCGCCGTAG
CCGCGCTGGGCTATCCGATCCGAACCGGCCGATTGGTTCGTTCCTGTTCCTCGGTCCAACCGGGGTCGGTAAAACCGAGC
TGTGTAAAACGCTGGCTAACTTTATGTTCGACAGCGACGACGCGATGGTGCGTATCGATATGTCCGAGTTTATGGAGAAA
CACTCCGTCTCGCGTCTGGTCGGTGCGCCTCCGGGATACGTCGGCTATGAAGAGGGCGGTTACCTGACCGAGGCGGTGCG
TCGTCGTCCTTATTCCGTCATTCTGCTGGATGAAGTGGAAAAAGCGCACCCGGATGTGTTCAACATTCTGCTGCAGGTAC
TCGACGACGGGCGTCTGACCGACGGGCAGGGGAGAACGGTCGACTTCCGTAATACGGTGGTCATCATGACCTCGAACCTC
GGTTCCGATCTGATTCAGGAACGGTTTGGCGAACTGGACTACGGTCATATGAAGGATCTGGTACTGGGAGTGGTAAGCCA
GAACTTCCGTCCGGAGTTTATTAACCGTATCGACGAAGTGGTGGTCTTCCATCCTCTGGGTGAGAAACACATTGCTTCTA
TTGCCCAGATCCAGCTGCAGCGTTTGTATAAACGCCTGGAAGAGCGTGGGTATGAAGTGCGGATGTCCGATGAGGCGCTG
AAGTTGCTGAGCGCCAACGGTTACGATCCGGTATACGGCGCGCGGCCACTGAAACGCGCTATTCAGCAGCAGATTGAGAA
CCCGTTAGCCCAGCAGATCCTTTCCGGTGAGCTGGTTCCGGGGAAAGCTGTCGAGCTGGTGGTGAAAGACGACCGTATTG
TGGCAGTGCAGTAA

Protein sequence :
MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAGVNAGKLRTDIEQALSRLPQVEGTGGD
VQPSQDLVRILNLCDKLAQKKKDNFISSELFVLAALESRGTLTDLLKSAGATTANVTQAIEQMRGGESVNDQGAEDQRQA
LKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLAL
DMGALVAGAKYRGEFEERLKGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR
QYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS
IRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLKRLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELE
QAKIAIEQARRVGDLARMSELQYGKIPELEKQLAAATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESERDKLL
RMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQERFGELDYGHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVRMSDEAL
KLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKAVELVVKDDRIVAVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-102 43
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-97 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 9e-98 41