Gene Information

Name : afeB (KPK_1043)
Accession : YP_002236912.1
Strain : Klebsiella pneumoniae 342
Genome accession: NC_011283
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1060564 - 1061385 bp
Length : 822 bp
Strand : -
Note : identified by similarity to GB:AAU94303.1; match to protein family HMM PF00005

DNA sequence : 
ATGAATGCAGCGCAAGCGGGACTGTATGTCGACCAGCTCACCGTCACCTGGCGCAACGGCCACACTGCCCTGCGCGACGC
CTCGTTCAGCGTACCGCGCGGCTCCATTGCCGCACTGGTGGGCGTTAACGGCTCGGGTAAATCCACACTGTTTAAAGCGC
TGATGGGCTTTGTGCGCGTCGGCCACGGCGAGATCGCCATACTCGGCCAGCCGGTCAACCGCGCGCTGCGCCAGAACCTG
GTCGCCTATGTCCCGCAGTCGGAAGAGGTGGACTGGTCCTTCCCGGTGCTGGTGGAGGATGTGGTGATGATGGGCCGCTA
CGGCCATATGGGCTGGCTGCGGCGGGCAAAGCCGCGCGATCGCGACATTGTCGATGCCGCGCTGGCCCGCGTGGGCATGA
GCGAGTACCGCCATCGGCAAATTGGCGAGCTCTCCGGCGGGCAGAAAAAGCGCGTTTTCCTTGCCCGCGCTATCGCTCAG
CAGGGTCAGGTGATCCTGCTGGATGAGCCTTTCACCGGCGTCGATGTGCAGACCGAAGCGCGGATCATCAGCCTGCTGCG
CGAGCTCCGCGATGAGGGCTGTACCATGCTGGTCTCCACCCACAACCTCGGGTCAGTGAGCGAATTTTGTGATTACACGG
TGATGGTGAAAGGCACCGTGCTGGCCAGCGGCCCGACAGAAACCACCTTCACCGCCGAGAATCTGGAGCGGGCTTTCAGC
GGCGTGCTACGCCACGTCGCGCTCACCGGCGGGGAAGCGCAGGTTATCACCGATGACGAGCGGCCGTTTATCAGCCGGCG
CGCGGCAGGAGGCCCACGATGA

Protein sequence : 
MNAAQAGLYVDQLTVTWRNGHTALRDASFSVPRGSIAALVGVNGSGKSTLFKALMGFVRVGHGEIAILGQPVNRALRQNL
VAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKPRDRDIVDAALARVGMSEYRHRQIGELSGGQKKRVFLARAIAQ
QGQVILLDEPFTGVDVQTEARIISLLRELRDEGCTMLVSTHNLGSVSEFCDYTVMVKGTVLASGPTETTFTAENLERAFS
GVLRHVALTGGEAQVITDDERPFISRRAAGGPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 6e-107 83
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 6e-107 83
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-108 83
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-108 83
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-108 83

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
afeB YP_002236912.1 iron ABC transporter ATP-binding protein BAC0350 Protein 2e-108 83
afeB YP_002236912.1 iron ABC transporter ATP-binding protein BAC0440 Protein 2e-78 62
afeB YP_002236912.1 iron ABC transporter ATP-binding protein BAC0400 Protein 7e-48 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
afeB YP_002236912.1 iron ABC transporter ATP-binding protein VFG0526 Protein 1e-108 83