Gene Information

Name : SG0585 (SG0585)
Accession : YP_002225671.1
Strain : Salmonella enterica 287/91
Genome accession: NC_011274
Putative virulence/resistance : Resistance
Product : transcriptional activator RamA
Function : -
COG functional category : K : Transcription
COG ID : COG4977
EC number : -
Position : 629336 - 629677 bp
Length : 342 bp
Strand : +
Note : -

DNA sequence : 
ATGACCATTTCCGCTCAGGTTATCGACACGATTGTCGAGTGGATTGATGATAATTTGAATCAGCCGTTACGTATTGATGA
TATTGCCCGTCATGCGGGGTATTCCAAGTGGCACCTGCAGCGCCTTTTTATGCAGTACAAAGGGGAGAGTCTGGGGCGCT
ACGTGCGTGAACGGAAGCGAAAACTGGCGGCGCGCGACCTGCGCGACACCGACCAGAAGGTGTATGATATTTGTCTCAAG
TATGGTTTTGATTCGCAGCAAACCTTTACGCGCATTTTTACCCGCACGTTCAACCTGCCGCCAGGCGCTTATCGTAAAGA
AAAGCATGGTCGTACGCATTGA

Protein sequence : 
MTISAQVIDTIVEWIDDNLNQPLRIDDIARHAGYSKWHLQRLFMQYKGESLGRYVRERKRKLAARDLRDTDQKVYDICLK
YGFDSQQTFTRIFTRTFNLPPGAYRKEKHGRTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 5e-18 48
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 9e-17 46
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 9e-17 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG0585 YP_002225671.1 transcriptional activator RamA CP001138.1.gene612.p Protein 4e-43 99
SG0585 YP_002225671.1 transcriptional activator RamA CP001918.1.gene327.p Protein 1e-18 48
SG0585 YP_002225671.1 transcriptional activator RamA CP000647.1.gene4499. Protein 2e-18 48
SG0585 YP_002225671.1 transcriptional activator RamA CP001138.1.gene4488. Protein 1e-18 48
SG0585 YP_002225671.1 transcriptional activator RamA NC_010558.1.6276025. Protein 4e-17 46
SG0585 YP_002225671.1 transcriptional activator RamA BAC0371 Protein 2e-17 45
SG0585 YP_002225671.1 transcriptional activator RamA NC_002695.1.914293.p Protein 2e-17 45
SG0585 YP_002225671.1 transcriptional activator RamA CP000647.1.gene1624. Protein 2e-17 45
SG0585 YP_002225671.1 transcriptional activator RamA CP000034.1.gene4505. Protein 3e-17 44
SG0585 YP_002225671.1 transcriptional activator RamA CP001918.1.gene2033. Protein 9e-18 44
SG0585 YP_002225671.1 transcriptional activator RamA BAC0560 Protein 2e-18 43
SG0585 YP_002225671.1 transcriptional activator RamA NC_002695.1.917339.p Protein 2e-18 43
SG0585 YP_002225671.1 transcriptional activator RamA CP000034.1.gene1596. Protein 2e-18 43
SG0585 YP_002225671.1 transcriptional activator RamA CP001138.1.gene1637. Protein 2e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG0585 YP_002225671.1 transcriptional activator RamA VFG0585 Protein 1e-18 48
SG0585 YP_002225671.1 transcriptional activator RamA VFG1038 Protein 4e-17 46