Gene Information

Name : SG4102 (SG4102)
Accession : YP_002228831.1
Strain : Salmonella enterica 287/91
Genome accession: NC_011274
Putative virulence/resistance : Virulence
Product : type-I secretion protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1538
EC number : -
Position : 4314993 - 4316312 bp
Length : 1320 bp
Strand : +
Note : -

DNA sequence :
ATGAAGATTAAGATGTTTTTTCTGACGACTGCTTTTATTACACAAAGCACATACGCCAGCGAGCTTCCGGTCATTCCTCT
AAGAGATTTAGTTAATGCCGCATTAACGCATCAGCCCTCTGTTGCTGTTTCATATTATGAGACTGAAAAGAAAAACAGTG
ACTTAGATCTTTCACGGGCAGCACTTTATCCTACCCTGGATCTAACATCTGGCCTTAATAATAACAGGAAAGAGTCATCA
GGTACCGAGAGGAACGTTGAAAATAAGGTGTCTTTATCATACCGAATAACGGATTTTGGAGTGAGGGGGGCTAATATCAG
GAAATCTGAATATGAAAGAGATAATAGTAAAACTGACTATGAAAAAACAAAGAATATAGTGTCTCAGGAGGTTGTGACAA
CCTATTACAACATCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGATGCTGGAA
ACTTTTTCGTTGCTGGTATCTTCCGGTGTAGCTATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATGCATTAAA
TACCAGAAGCATTATGTATCAGTCGATGTTGGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAATTTATCGC
CAGTTCAGATTCAAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAAGCCCTGAAAAACTTATGGAC
ATGGTGATGAAATACAACGATGACTATAAGATGCTTGTCAATACCCGAAAAGCCGCGACCGAAGATATTAATGCCGCAAA
ATCATCCTATTTTCCGACTGTAGATCTTGTTTCCAGCTATGTACAGAATAACCCGAGCGGTAGTGCCAAAAAAAGTGATT
ATGAAGATGAGTTTAAAACGGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTCAGAAATTCAGCCCAGGAAAGAAAA
ATGGTGGCAAGTTACTCGCAGGCTAAGCTGCAAATTGACGATTTTTTGATTAAAACGCGTTATAACATTGATTCACAACT
TTCAAGATACGCCGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACTGAATTAT
ATGAGCAGGAGTTTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGCATATGTA
AGCATGATCGACAGCAAATATAGCCTGTATATTTTAAAGCTACAGCAACTCTCATTGATTTTTCATTTAATGGATTATTT
AAAAGGAAATACTGAAAGTGAGTTAAATGTAATGAAATGA

Protein sequence :
MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRAALYPTLDLTSGLNNNRKESS
GTERNVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDYEKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLE
TFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPVQIQSDEKFNLFKKYIFVESPEKLMD
MVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRNSAQERK
MVASYSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYV
SMIDSKYSLYILKLQQLSLIFHLMDYLKGNTESELNVMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
siiC CAE11795.1 putative type-I secretion protein, putative outer membrane component Virulence SPI-4 Protein 0.0 100
SC4138 YP_219125.1 ABC transporter outer membrane protein Not tested SPI-4 Protein 0.0 100
STM4259 NP_463124.1 ABC exporter outer membrane component Not tested SPI-4 Protein 0.0 100
STY4456 NP_458556.1 putative type-I secretion protein Not tested SPI-4 Protein 0.0 99
spi4_C AAC26641.1 ABC exporter outer membrane component homolog Virulence SPI-4 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG4102 YP_002228831.1 type-I secretion protein VFG0579 Protein 0.0 100