Gene Information

Name : SG0272 (SG0272)
Accession : YP_002225406.1
Strain : Salmonella enterica 287/91
Genome accession: NC_011274
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 310768 - 311226 bp
Length : 459 bp
Strand : -
Note : -

DNA sequence :
ATGACCACAGCAATTAACCCTGAACTTATCCCTGCGCCTGATGAAACCCTCATCACCGCCACGCCCGTACCGGATGAGGA
CCGCCCTGACTTCTGGCCCCGCCACTTCCGGGGCGTTCCGCAGTGGATATTACTGGAGCCCCGTATCTTCGCCTGGACGG
ACCGCCTGTGCGCGGACTACAGCGGCGGTATCTGGCAGTTTTACACGCTGAGCAACGGTGGCGCATTTATGGCCCCGGAG
GCGAATGACGGGGACGACACCTGGTCACTGTTCAACGCCATGAACGGCAACAGCGCGGACATGAGCCCTGAGGCGGTCGG
GATCACCGCCTGCCTGCTGGAGTACAGCCACCATGCCTGCCGTACCGGCAGCGACCTGATGACCGCGCATTACCTCCACC
TGCGGGATTATACCCTTAACCATCCTGAATGCAGCGCCATCATGCATATCACCGACTGA

Protein sequence :
MTTAINPELIPAPDETLITATPVPDEDRPDFWPRHFRGVPQWILLEPRIFAWTDRLCADYSGGIWQFYTLSNGGAFMAPE
ANDGDDTWSLFNAMNGNSADMSPEAVGITACLLEYSHHACRTGSDLMTAHYLHLRDYTLNHPECSAIMHITD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 7e-42 66
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 7e-42 66
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 6e-42 66
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 7e-42 65
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 1e-45 63
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 3e-47 63
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 5e-45 62
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 5e-43 62
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 8e-46 62
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 5e-43 62
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 2e-46 62
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 2e-42 61
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 2e-46 61
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 9e-44 61
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-41 60
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-41 60
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-41 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG0272 YP_002225406.1 hypothetical protein VFG0659 Protein 2e-42 66
SG0272 YP_002225406.1 hypothetical protein VFG1677 Protein 1e-47 63
SG0272 YP_002225406.1 hypothetical protein VFG1527 Protein 6e-47 62
SG0272 YP_002225406.1 hypothetical protein VFG1616 Protein 7e-47 61