Gene Information

Name : SG1233 (SG1233)
Accession : YP_002226269.1
Strain : Salmonella enterica 287/91
Genome accession: NC_011274
Putative virulence/resistance : Virulence
Product : type III secretion system, effector protein SopE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1307312 - 1308034 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence : 
GTGACAAAAATAACTTTATTTCCCCATAACTTTAGAATCCAAAAACAGGAAACCACACCACTAAAAGAAAAATCAACCGA
GAAAAATTCTTTAGCAAAAAGTATTCTCGCAGTAAAAAATCACTTCATCAAATTAAATTCAAAATTATCGGAACGTTTTA
TTTCGCATAAGAACACTGAATCTTCTGCAACACACTTTCACCGAGGAAGCGCATCTGAGGGCCGGGCAGTGTTGACAAAT
AAAGTCGTTAAAAACTTTATGCTTCAAACGCTCCATGATATAGATATTAGAGGTAGCGCGAGTAAAGACCCCGCATACGC
CAGCCAGACCCGTGAAGCTATACTATCGGCAGTTTACAGCAAGTATAAAGATCAGTATTGTAACTTGCTCATCAGCAAAG
GAATCGACATAGCGCCTTTTCTTAAGGAAATTGGCGAGGCTGCGCAAAATGCAGGTCTGCCCGGAGCAACCAAGAATGAC
GTTTTTACGCCAAGCGGCGCAGGAGCCAATCCTTTTATAACTCCGTTGATTACATCAGCATACAGTAAGTATCCACATAT
GTTTACCAGTCAACATCAGAAGGCATCCTTTAACATCTATGCGGAGAAGATCATTATGACAGAAGTTGTACCGCTGTTTA
ATGAGTGTGCTATGCCGACTCCACAGCAATTCCAACAAATACTAGAAAACATTGCTAATAAATATATCCCAAACACTCCC
TGA

Protein sequence : 
MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTN
KVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKND
VFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIPNTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopE NP_458691.1 invasion-associated secreted protein. Virulence SPI-7 Protein 6e-98 90
sopE NP_807899.1 invasion-associated secreted protein Virulence SPI-7 Protein 6e-98 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SG1233 YP_002226269.1 type III secretion system, effector protein SopE VFG0467 Protein 6e-79 66